Protein–RNA interactions for Protein: Q9UGU5

HMGXB4, HMG domain-containing protein 4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4Q9UGU5 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.5■□□□□ 0.39
HMGXB4Q9UGU5 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMGXB4Q9UGU5 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMGXB4Q9UGU5 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
HMGXB4Q9UGU5 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.5■□□□□ 0.39
HMGXB4Q9UGU5 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.5■□□□□ 0.39
HMGXB4Q9UGU5 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
HMGXB4Q9UGU5 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
HMGXB4Q9UGU5 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.5■□□□□ 0.39
HMGXB4Q9UGU5 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMGXB4Q9UGU5 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.5■□□□□ 0.39
HMGXB4Q9UGU5 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMGXB4Q9UGU5 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.5■□□□□ 0.39
HMGXB4Q9UGU5 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HMGXB4Q9UGU5 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HMGXB4Q9UGU5 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMGXB4Q9UGU5 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMGXB4Q9UGU5 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.5■□□□□ 0.39
HMGXB4Q9UGU5 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.5■□□□□ 0.39
HMGXB4Q9UGU5 KRT18P32-201ENST00000424695 1287 ntBASIC17.5■□□□□ 0.39
HMGXB4Q9UGU5 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.5■□□□□ 0.39
HMGXB4Q9UGU5 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HMGXB4Q9UGU5 AC023141.5-201ENST00000458585 616 ntBASIC17.5■□□□□ 0.39
HMGXB4Q9UGU5 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.5■□□□□ 0.39
HMGXB4Q9UGU5 AC105233.2-201ENST00000523697 349 ntBASIC17.5■□□□□ 0.39
HMGXB4Q9UGU5 AF228730.5-201ENST00000530288 346 ntBASIC17.5■□□□□ 0.39
HMGXB4Q9UGU5 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HMGXB4Q9UGU5 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.5■□□□□ 0.39
HMGXB4Q9UGU5 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMGXB4Q9UGU5 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.5■□□□□ 0.39
HMGXB4Q9UGU5 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMGXB4Q9UGU5 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
HMGXB4Q9UGU5 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.5■□□□□ 0.39
HMGXB4Q9UGU5 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.5■□□□□ 0.39
HMGXB4Q9UGU5 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMGXB4Q9UGU5 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
HMGXB4Q9UGU5 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMGXB4Q9UGU5 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
HMGXB4Q9UGU5 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
HMGXB4Q9UGU5 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HMGXB4Q9UGU5 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HMGXB4Q9UGU5 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGXB4Q9UGU5 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.49■□□□□ 0.39
HMGXB4Q9UGU5 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.49■□□□□ 0.39
HMGXB4Q9UGU5 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGXB4Q9UGU5 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGXB4Q9UGU5 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGXB4Q9UGU5 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGXB4Q9UGU5 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.49■□□□□ 0.39
HMGXB4Q9UGU5 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.49■□□□□ 0.39
HMGXB4Q9UGU5 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.49■□□□□ 0.39
HMGXB4Q9UGU5 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.49■□□□□ 0.39
HMGXB4Q9UGU5 AC009093.7-201ENST00000623853 1223 ntBASIC17.49■□□□□ 0.39
HMGXB4Q9UGU5 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.49■□□□□ 0.39
HMGXB4Q9UGU5 AC084121.4-201ENST00000641598 221 ntBASIC17.49■□□□□ 0.39
HMGXB4Q9UGU5 AF228730.8-201ENST00000642140 221 ntBASIC17.49■□□□□ 0.39
HMGXB4Q9UGU5 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HMGXB4Q9UGU5 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HMGXB4Q9UGU5 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGXB4Q9UGU5 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HMGXB4Q9UGU5 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
HMGXB4Q9UGU5 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGXB4Q9UGU5 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGXB4Q9UGU5 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGXB4Q9UGU5 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGXB4Q9UGU5 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGXB4Q9UGU5 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGXB4Q9UGU5 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGXB4Q9UGU5 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
HMGXB4Q9UGU5 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.48■□□□□ 0.39
HMGXB4Q9UGU5 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMGXB4Q9UGU5 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMGXB4Q9UGU5 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HMGXB4Q9UGU5 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMGXB4Q9UGU5 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.48■□□□□ 0.39
HMGXB4Q9UGU5 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.48■□□□□ 0.39
HMGXB4Q9UGU5 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HMGXB4Q9UGU5 REXO1L8P-201ENST00000604378 1897 ntBASIC17.48■□□□□ 0.39
HMGXB4Q9UGU5 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.48■□□□□ 0.39
HMGXB4Q9UGU5 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMGXB4Q9UGU5 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMGXB4Q9UGU5 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMGXB4Q9UGU5 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMGXB4Q9UGU5 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMGXB4Q9UGU5 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.48■□□□□ 0.39
HMGXB4Q9UGU5 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMGXB4Q9UGU5 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.48■□□□□ 0.39
HMGXB4Q9UGU5 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.48■□□□□ 0.39
HMGXB4Q9UGU5 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMGXB4Q9UGU5 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HMGXB4Q9UGU5 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
HMGXB4Q9UGU5 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HMGXB4Q9UGU5 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMGXB4Q9UGU5 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.48■□□□□ 0.39
HMGXB4Q9UGU5 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.48■□□□□ 0.39
HMGXB4Q9UGU5 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HMGXB4Q9UGU5 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.48■□□□□ 0.39
HMGXB4Q9UGU5 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.48■□□□□ 0.39
HMGXB4Q9UGU5 KRT8P23-201ENST00000560090 1207 ntBASIC17.48■□□□□ 0.39
HMGXB4Q9UGU5 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms