Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.69■□□□□ 0.42
CNTN3Q9P232 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNTN3Q9P232 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.69■□□□□ 0.42
CNTN3Q9P232 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CNTN3Q9P232 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNTN3Q9P232 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNTN3Q9P232 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.69■□□□□ 0.42
CNTN3Q9P232 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.69■□□□□ 0.42
CNTN3Q9P232 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CNTN3Q9P232 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CNTN3Q9P232 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNTN3Q9P232 FO538757.1-201ENST00000623083 1397 ntBASIC17.68■□□□□ 0.42
CNTN3Q9P232 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
CNTN3Q9P232 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNTN3Q9P232 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNTN3Q9P232 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CNTN3Q9P232 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CNTN3Q9P232 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNTN3Q9P232 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.68■□□□□ 0.42
CNTN3Q9P232 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNTN3Q9P232 TREML5P-201ENST00000421694 576 ntBASIC17.68■□□□□ 0.42
CNTN3Q9P232 AL353705.2-201ENST00000428243 662 ntBASIC17.68■□□□□ 0.42
CNTN3Q9P232 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.68■□□□□ 0.42
CNTN3Q9P232 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CNTN3Q9P232 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CNTN3Q9P232 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.68■□□□□ 0.42
CNTN3Q9P232 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.68■□□□□ 0.42
CNTN3Q9P232 SPCS2P1-201ENST00000561636 679 ntBASIC17.68■□□□□ 0.42
CNTN3Q9P232 AC061975.2-201ENST00000581722 295 ntBASIC17.68■□□□□ 0.42
CNTN3Q9P232 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.68■□□□□ 0.42
CNTN3Q9P232 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.68■□□□□ 0.42
CNTN3Q9P232 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.68■□□□□ 0.42
CNTN3Q9P232 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CNTN3Q9P232 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.68■□□□□ 0.42
CNTN3Q9P232 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CNTN3Q9P232 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.68■□□□□ 0.42
CNTN3Q9P232 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.68■□□□□ 0.42
CNTN3Q9P232 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CNTN3Q9P232 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
CNTN3Q9P232 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.68■□□□□ 0.42
CNTN3Q9P232 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNTN3Q9P232 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNTN3Q9P232 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CNTN3Q9P232 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
CNTN3Q9P232 FLJ38576-201ENST00000623820 2459 ntBASIC17.67■□□□□ 0.42
CNTN3Q9P232 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CNTN3Q9P232 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.67■□□□□ 0.42
CNTN3Q9P232 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CNTN3Q9P232 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNTN3Q9P232 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.67■□□□□ 0.42
CNTN3Q9P232 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNTN3Q9P232 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNTN3Q9P232 AC005622.1-201ENST00000636801 1703 ntBASIC17.67■□□□□ 0.42
CNTN3Q9P232 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.67■□□□□ 0.42
CNTN3Q9P232 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.67■□□□□ 0.42
CNTN3Q9P232 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNTN3Q9P232 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CNTN3Q9P232 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.67■□□□□ 0.42
CNTN3Q9P232 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.67■□□□□ 0.42
CNTN3Q9P232 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CNTN3Q9P232 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.67■□□□□ 0.42
CNTN3Q9P232 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
CNTN3Q9P232 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.67■□□□□ 0.42
CNTN3Q9P232 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.67■□□□□ 0.42
CNTN3Q9P232 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.67■□□□□ 0.42
CNTN3Q9P232 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CNTN3Q9P232 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.67■□□□□ 0.42
CNTN3Q9P232 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.67■□□□□ 0.42
CNTN3Q9P232 AC011467.4-201ENST00000594891 528 ntBASIC17.67■□□□□ 0.42
CNTN3Q9P232 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CNTN3Q9P232 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNTN3Q9P232 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CNTN3Q9P232 AC018695.7-201ENST00000624587 2492 ntBASIC17.67■□□□□ 0.42
CNTN3Q9P232 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
CNTN3Q9P232 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNTN3Q9P232 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNTN3Q9P232 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNTN3Q9P232 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CNTN3Q9P232 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNTN3Q9P232 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
CNTN3Q9P232 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CNTN3Q9P232 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CNTN3Q9P232 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNTN3Q9P232 AL035456.1-201ENST00000456064 1369 ntBASIC17.66■□□□□ 0.42
CNTN3Q9P232 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.66■□□□□ 0.42
CNTN3Q9P232 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CNTN3Q9P232 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CNTN3Q9P232 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.66■□□□□ 0.42
CNTN3Q9P232 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNTN3Q9P232 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNTN3Q9P232 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CNTN3Q9P232 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.66■□□□□ 0.42
CNTN3Q9P232 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.66■□□□□ 0.42
CNTN3Q9P232 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CNTN3Q9P232 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNTN3Q9P232 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CNTN3Q9P232 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.66■□□□□ 0.42
CNTN3Q9P232 AC092580.3-201ENST00000430932 139 ntBASIC17.66■□□□□ 0.42
CNTN3Q9P232 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.66■□□□□ 0.42
CNTN3Q9P232 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms