Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CXXC1Q9P0U4 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CXXC1Q9P0U4 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC17.5■□□□□ 0.39
CXXC1Q9P0U4 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CXXC1Q9P0U4 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CXXC1Q9P0U4 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.5■□□□□ 0.39
CXXC1Q9P0U4 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CXXC1Q9P0U4 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.5■□□□□ 0.39
CXXC1Q9P0U4 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CXXC1Q9P0U4 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CXXC1Q9P0U4 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CXXC1Q9P0U4 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CXXC1Q9P0U4 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CXXC1Q9P0U4 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CXXC1Q9P0U4 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CXXC1Q9P0U4 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CXXC1Q9P0U4 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC17.5■□□□□ 0.39
CXXC1Q9P0U4 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC17.5■□□□□ 0.39
CXXC1Q9P0U4 FAM21FP-201ENST00000426241 1131 ntBASIC17.5■□□□□ 0.39
CXXC1Q9P0U4 AL162726.2-201ENST00000438986 1017 ntBASIC17.5■□□□□ 0.39
CXXC1Q9P0U4 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CXXC1Q9P0U4 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC17.5■□□□□ 0.39
CXXC1Q9P0U4 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC17.5■□□□□ 0.39
CXXC1Q9P0U4 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CXXC1Q9P0U4 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
CXXC1Q9P0U4 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CXXC1Q9P0U4 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CXXC1Q9P0U4 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
CXXC1Q9P0U4 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CXXC1Q9P0U4 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CXXC1Q9P0U4 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CXXC1Q9P0U4 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CXXC1Q9P0U4 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.5■□□□□ 0.39
CXXC1Q9P0U4 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CXXC1Q9P0U4 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CXXC1Q9P0U4 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CXXC1Q9P0U4 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CXXC1Q9P0U4 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CXXC1Q9P0U4 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CXXC1Q9P0U4 AL136982.4-201ENST00000437689 1740 ntBASIC17.5■□□□□ 0.39
CXXC1Q9P0U4 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CXXC1Q9P0U4 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CXXC1Q9P0U4 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CXXC1Q9P0U4 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CXXC1Q9P0U4 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CXXC1Q9P0U4 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CXXC1Q9P0U4 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CXXC1Q9P0U4 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CXXC1Q9P0U4 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.49■□□□□ 0.39
CXXC1Q9P0U4 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CXXC1Q9P0U4 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CXXC1Q9P0U4 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.49■□□□□ 0.39
CXXC1Q9P0U4 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CXXC1Q9P0U4 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CXXC1Q9P0U4 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CXXC1Q9P0U4 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CXXC1Q9P0U4 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC17.49■□□□□ 0.39
CXXC1Q9P0U4 RPL7P3-201ENST00000441388 714 ntBASIC17.49■□□□□ 0.39
CXXC1Q9P0U4 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC17.49■□□□□ 0.39
CXXC1Q9P0U4 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC17.49■□□□□ 0.39
CXXC1Q9P0U4 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CXXC1Q9P0U4 EMC4-209ENST00000559421 497 ntTSL 2 BASIC17.49■□□□□ 0.39
CXXC1Q9P0U4 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CXXC1Q9P0U4 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC17.49■□□□□ 0.39
CXXC1Q9P0U4 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CXXC1Q9P0U4 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC17.49■□□□□ 0.39
CXXC1Q9P0U4 LINC01115-203ENST00000606068 577 ntBASIC17.49■□□□□ 0.39
CXXC1Q9P0U4 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CXXC1Q9P0U4 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CXXC1Q9P0U4 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CXXC1Q9P0U4 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.49■□□□□ 0.39
CXXC1Q9P0U4 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC17.49■□□□□ 0.39
CXXC1Q9P0U4 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
CXXC1Q9P0U4 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CXXC1Q9P0U4 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CXXC1Q9P0U4 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CXXC1Q9P0U4 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CXXC1Q9P0U4 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC17.49■□□□□ 0.39
CXXC1Q9P0U4 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CXXC1Q9P0U4 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CXXC1Q9P0U4 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CXXC1Q9P0U4 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CXXC1Q9P0U4 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC17.48■□□□□ 0.39
CXXC1Q9P0U4 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CXXC1Q9P0U4 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CXXC1Q9P0U4 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC17.48■□□□□ 0.39
CXXC1Q9P0U4 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CXXC1Q9P0U4 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CXXC1Q9P0U4 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.48■□□□□ 0.39
CXXC1Q9P0U4 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC17.48■□□□□ 0.39
CXXC1Q9P0U4 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CXXC1Q9P0U4 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CXXC1Q9P0U4 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CXXC1Q9P0U4 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.48■□□□□ 0.39
CXXC1Q9P0U4 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CXXC1Q9P0U4 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CXXC1Q9P0U4 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CXXC1Q9P0U4 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CXXC1Q9P0U4 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CXXC1Q9P0U4 MGST3-203ENST00000367885 680 ntTSL 2 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms