Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.75■□□□□ 0.27
NCKIPSDQ9NZQ3 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
NCKIPSDQ9NZQ3 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.75■□□□□ 0.27
NCKIPSDQ9NZQ3 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
NCKIPSDQ9NZQ3 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
NCKIPSDQ9NZQ3 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.75■□□□□ 0.27
NCKIPSDQ9NZQ3 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NCKIPSDQ9NZQ3 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NCKIPSDQ9NZQ3 AL662844.4-201ENST00000606367 2838 ntBASIC16.75■□□□□ 0.27
NCKIPSDQ9NZQ3 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NCKIPSDQ9NZQ3 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.75■□□□□ 0.27
NCKIPSDQ9NZQ3 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NCKIPSDQ9NZQ3 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
NCKIPSDQ9NZQ3 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NCKIPSDQ9NZQ3 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
NCKIPSDQ9NZQ3 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.75■□□□□ 0.27
NCKIPSDQ9NZQ3 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.75■□□□□ 0.27
NCKIPSDQ9NZQ3 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.74■□□□□ 0.27
NCKIPSDQ9NZQ3 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.74■□□□□ 0.27
NCKIPSDQ9NZQ3 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NCKIPSDQ9NZQ3 AC129492.6-201ENST00000611383 1305 ntBASIC16.74■□□□□ 0.27
NCKIPSDQ9NZQ3 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NCKIPSDQ9NZQ3 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NCKIPSDQ9NZQ3 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
NCKIPSDQ9NZQ3 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.74■□□□□ 0.27
NCKIPSDQ9NZQ3 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.74■□□□□ 0.27
NCKIPSDQ9NZQ3 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NCKIPSDQ9NZQ3 AL391256.1-201ENST00000443260 1855 ntBASIC16.74■□□□□ 0.27
NCKIPSDQ9NZQ3 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NCKIPSDQ9NZQ3 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.74■□□□□ 0.27
NCKIPSDQ9NZQ3 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NCKIPSDQ9NZQ3 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NCKIPSDQ9NZQ3 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NCKIPSDQ9NZQ3 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.74■□□□□ 0.27
NCKIPSDQ9NZQ3 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.74■□□□□ 0.27
NCKIPSDQ9NZQ3 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NCKIPSDQ9NZQ3 FAM185BP-201ENST00000443595 716 ntBASIC16.74■□□□□ 0.27
NCKIPSDQ9NZQ3 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.74■□□□□ 0.27
NCKIPSDQ9NZQ3 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.74■□□□□ 0.27
NCKIPSDQ9NZQ3 AC112191.1-201ENST00000523689 701 ntBASIC16.74■□□□□ 0.27
NCKIPSDQ9NZQ3 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NCKIPSDQ9NZQ3 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.74■□□□□ 0.27
NCKIPSDQ9NZQ3 AC004835.2-201ENST00000603762 682 ntBASIC16.74■□□□□ 0.27
NCKIPSDQ9NZQ3 AC091812.2-201ENST00000619081 385 ntBASIC16.74■□□□□ 0.27
NCKIPSDQ9NZQ3 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NCKIPSDQ9NZQ3 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NCKIPSDQ9NZQ3 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NCKIPSDQ9NZQ3 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NCKIPSDQ9NZQ3 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
NCKIPSDQ9NZQ3 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
NCKIPSDQ9NZQ3 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NCKIPSDQ9NZQ3 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NCKIPSDQ9NZQ3 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
NCKIPSDQ9NZQ3 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NCKIPSDQ9NZQ3 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NCKIPSDQ9NZQ3 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.74■□□□□ 0.27
NCKIPSDQ9NZQ3 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NCKIPSDQ9NZQ3 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
NCKIPSDQ9NZQ3 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.73■□□□□ 0.27
NCKIPSDQ9NZQ3 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NCKIPSDQ9NZQ3 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.73■□□□□ 0.27
NCKIPSDQ9NZQ3 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NCKIPSDQ9NZQ3 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NCKIPSDQ9NZQ3 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
NCKIPSDQ9NZQ3 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NCKIPSDQ9NZQ3 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NCKIPSDQ9NZQ3 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.73■□□□□ 0.27
NCKIPSDQ9NZQ3 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.73■□□□□ 0.27
NCKIPSDQ9NZQ3 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NCKIPSDQ9NZQ3 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NCKIPSDQ9NZQ3 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NCKIPSDQ9NZQ3 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NCKIPSDQ9NZQ3 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.73■□□□□ 0.27
NCKIPSDQ9NZQ3 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NCKIPSDQ9NZQ3 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.73■□□□□ 0.27
NCKIPSDQ9NZQ3 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.73■□□□□ 0.27
NCKIPSDQ9NZQ3 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NCKIPSDQ9NZQ3 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
NCKIPSDQ9NZQ3 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NCKIPSDQ9NZQ3 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NCKIPSDQ9NZQ3 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.73■□□□□ 0.27
NCKIPSDQ9NZQ3 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.73■□□□□ 0.27
NCKIPSDQ9NZQ3 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NCKIPSDQ9NZQ3 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.73■□□□□ 0.27
NCKIPSDQ9NZQ3 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.73■□□□□ 0.27
NCKIPSDQ9NZQ3 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.73■□□□□ 0.27
NCKIPSDQ9NZQ3 AL031432.2-201ENST00000566714 459 ntBASIC16.73■□□□□ 0.27
NCKIPSDQ9NZQ3 AL928711.1-201ENST00000570165 459 ntBASIC16.73■□□□□ 0.27
NCKIPSDQ9NZQ3 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.73■□□□□ 0.27
NCKIPSDQ9NZQ3 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NCKIPSDQ9NZQ3 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.73■□□□□ 0.27
NCKIPSDQ9NZQ3 REXO1L3P-201ENST00000622202 1288 ntBASIC16.73■□□□□ 0.27
NCKIPSDQ9NZQ3 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.73■□□□□ 0.27
NCKIPSDQ9NZQ3 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NCKIPSDQ9NZQ3 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
NCKIPSDQ9NZQ3 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
NCKIPSDQ9NZQ3 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NCKIPSDQ9NZQ3 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
NCKIPSDQ9NZQ3 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.73■□□□□ 0.27
NCKIPSDQ9NZQ3 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms