Protein–RNA interactions for Protein: Q9NUM3

SLC39A9, Zinc transporter ZIP9, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A9Q9NUM3 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SLC39A9Q9NUM3 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
SLC39A9Q9NUM3 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SLC39A9Q9NUM3 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
SLC39A9Q9NUM3 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
SLC39A9Q9NUM3 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SLC39A9Q9NUM3 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
SLC39A9Q9NUM3 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SLC39A9Q9NUM3 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SLC39A9Q9NUM3 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC13.31□□□□□ -0.28
SLC39A9Q9NUM3 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SLC39A9Q9NUM3 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC13.31□□□□□ -0.28
SLC39A9Q9NUM3 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SLC39A9Q9NUM3 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC13.31□□□□□ -0.28
SLC39A9Q9NUM3 SRP19-202ENST00000445150 833 ntTSL 2 BASIC13.31□□□□□ -0.28
SLC39A9Q9NUM3 DUT-205ENST00000558813 769 ntTSL 2 BASIC13.31□□□□□ -0.28
SLC39A9Q9NUM3 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC13.31□□□□□ -0.28
SLC39A9Q9NUM3 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC13.31□□□□□ -0.28
SLC39A9Q9NUM3 AL138831.2-201ENST00000606564 490 ntBASIC13.31□□□□□ -0.28
SLC39A9Q9NUM3 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SLC39A9Q9NUM3 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SLC39A9Q9NUM3 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SLC39A9Q9NUM3 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.31□□□□□ -0.28
SLC39A9Q9NUM3 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SLC39A9Q9NUM3 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
SLC39A9Q9NUM3 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SLC39A9Q9NUM3 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
SLC39A9Q9NUM3 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SLC39A9Q9NUM3 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SLC39A9Q9NUM3 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC13.31□□□□□ -0.28
SLC39A9Q9NUM3 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
SLC39A9Q9NUM3 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
SLC39A9Q9NUM3 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
SLC39A9Q9NUM3 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SLC39A9Q9NUM3 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
SLC39A9Q9NUM3 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC13.31□□□□□ -0.28
SLC39A9Q9NUM3 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SLC39A9Q9NUM3 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC13.31□□□□□ -0.28
SLC39A9Q9NUM3 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SLC39A9Q9NUM3 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
SLC39A9Q9NUM3 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SLC39A9Q9NUM3 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.31□□□□□ -0.28
SLC39A9Q9NUM3 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
SLC39A9Q9NUM3 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
SLC39A9Q9NUM3 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.31□□□□□ -0.28
SLC39A9Q9NUM3 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SLC39A9Q9NUM3 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
SLC39A9Q9NUM3 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
SLC39A9Q9NUM3 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SLC39A9Q9NUM3 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SLC39A9Q9NUM3 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SLC39A9Q9NUM3 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC13.3□□□□□ -0.28
SLC39A9Q9NUM3 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SLC39A9Q9NUM3 SP100-205ENST00000409824 1802 ntTSL 5 BASIC13.3□□□□□ -0.28
SLC39A9Q9NUM3 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
SLC39A9Q9NUM3 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC13.3□□□□□ -0.28
SLC39A9Q9NUM3 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC13.3□□□□□ -0.28
SLC39A9Q9NUM3 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
SLC39A9Q9NUM3 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SLC39A9Q9NUM3 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SLC39A9Q9NUM3 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
SLC39A9Q9NUM3 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC13.3□□□□□ -0.28
SLC39A9Q9NUM3 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SLC39A9Q9NUM3 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC13.3□□□□□ -0.28
SLC39A9Q9NUM3 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
SLC39A9Q9NUM3 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SLC39A9Q9NUM3 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC13.3□□□□□ -0.28
SLC39A9Q9NUM3 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC13.3□□□□□ -0.28
SLC39A9Q9NUM3 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
SLC39A9Q9NUM3 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC13.3□□□□□ -0.28
SLC39A9Q9NUM3 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SLC39A9Q9NUM3 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SLC39A9Q9NUM3 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SLC39A9Q9NUM3 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
SLC39A9Q9NUM3 KLF4P1-201ENST00000412782 1185 ntBASIC13.3□□□□□ -0.28
SLC39A9Q9NUM3 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC13.3□□□□□ -0.28
SLC39A9Q9NUM3 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC13.3□□□□□ -0.28
SLC39A9Q9NUM3 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC13.3□□□□□ -0.28
SLC39A9Q9NUM3 VENTXP5-201ENST00000523979 775 ntBASIC13.3□□□□□ -0.28
SLC39A9Q9NUM3 CD320-202ENST00000537716 1119 ntTSL 2 BASIC13.3□□□□□ -0.28
SLC39A9Q9NUM3 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SLC39A9Q9NUM3 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC13.3□□□□□ -0.28
SLC39A9Q9NUM3 AC145285.6-201ENST00000604632 637 ntBASIC13.3□□□□□ -0.28
SLC39A9Q9NUM3 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
SLC39A9Q9NUM3 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
SLC39A9Q9NUM3 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC13.3□□□□□ -0.28
SLC39A9Q9NUM3 AP005117.1-202ENST00000581724 1908 ntBASIC13.3□□□□□ -0.28
SLC39A9Q9NUM3 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.3□□□□□ -0.28
SLC39A9Q9NUM3 LINC00895-201ENST00000629028 1637 ntBASIC13.3□□□□□ -0.28
SLC39A9Q9NUM3 AC067750.1-201ENST00000608826 6545 ntBASIC13.3□□□□□ -0.28
SLC39A9Q9NUM3 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
SLC39A9Q9NUM3 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC13.3□□□□□ -0.28
SLC39A9Q9NUM3 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SLC39A9Q9NUM3 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SLC39A9Q9NUM3 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SLC39A9Q9NUM3 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SLC39A9Q9NUM3 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SLC39A9Q9NUM3 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SLC39A9Q9NUM3 AC002310.6-201ENST00000624451 1377 ntBASIC13.3□□□□□ -0.28
SLC39A9Q9NUM3 AL021920.2-201ENST00000624828 1351 ntBASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms