Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCM2LQ9NUG4 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.79■□□□□ 0.12
CCM2LQ9NUG4 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCM2LQ9NUG4 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCM2LQ9NUG4 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.79■□□□□ 0.12
CCM2LQ9NUG4 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CCM2LQ9NUG4 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCM2LQ9NUG4 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCM2LQ9NUG4 KRT8P49-201ENST00000604166 1432 ntBASIC15.78■□□□□ 0.12
CCM2LQ9NUG4 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCM2LQ9NUG4 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCM2LQ9NUG4 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.78■□□□□ 0.12
CCM2LQ9NUG4 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCM2LQ9NUG4 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCM2LQ9NUG4 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
CCM2LQ9NUG4 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CCM2LQ9NUG4 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CCM2LQ9NUG4 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.78■□□□□ 0.12
CCM2LQ9NUG4 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCM2LQ9NUG4 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.78■□□□□ 0.12
CCM2LQ9NUG4 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.78■□□□□ 0.12
CCM2LQ9NUG4 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCM2LQ9NUG4 RNPS1P1-201ENST00000507437 918 ntBASIC15.78■□□□□ 0.12
CCM2LQ9NUG4 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.78■□□□□ 0.12
CCM2LQ9NUG4 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.78■□□□□ 0.12
CCM2LQ9NUG4 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.78■□□□□ 0.12
CCM2LQ9NUG4 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.78■□□□□ 0.12
CCM2LQ9NUG4 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.78■□□□□ 0.12
CCM2LQ9NUG4 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CCM2LQ9NUG4 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCM2LQ9NUG4 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCM2LQ9NUG4 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.78■□□□□ 0.12
CCM2LQ9NUG4 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CCM2LQ9NUG4 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCM2LQ9NUG4 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCM2LQ9NUG4 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CCM2LQ9NUG4 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCM2LQ9NUG4 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
CCM2LQ9NUG4 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCM2LQ9NUG4 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
CCM2LQ9NUG4 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CCM2LQ9NUG4 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCM2LQ9NUG4 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.77■□□□□ 0.12
CCM2LQ9NUG4 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CCM2LQ9NUG4 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCM2LQ9NUG4 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CCM2LQ9NUG4 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCM2LQ9NUG4 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCM2LQ9NUG4 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CCM2LQ9NUG4 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCM2LQ9NUG4 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
CCM2LQ9NUG4 AP002414.1-201ENST00000391405 1147 ntBASIC15.77■□□□□ 0.12
CCM2LQ9NUG4 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.77■□□□□ 0.12
CCM2LQ9NUG4 KLF4P1-201ENST00000412782 1185 ntBASIC15.77■□□□□ 0.12
CCM2LQ9NUG4 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CCM2LQ9NUG4 KRT18P67-201ENST00000432816 1264 ntBASIC15.77■□□□□ 0.12
CCM2LQ9NUG4 MINOS1P3-201ENST00000457048 203 ntBASIC15.77■□□□□ 0.12
CCM2LQ9NUG4 AF186996.4-201ENST00000467186 377 ntBASIC15.77■□□□□ 0.12
CCM2LQ9NUG4 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC15.77■□□□□ 0.12
CCM2LQ9NUG4 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.77■□□□□ 0.12
CCM2LQ9NUG4 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CCM2LQ9NUG4 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC15.77■□□□□ 0.12
CCM2LQ9NUG4 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.77■□□□□ 0.12
CCM2LQ9NUG4 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCM2LQ9NUG4 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
CCM2LQ9NUG4 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.77■□□□□ 0.11
CCM2LQ9NUG4 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCM2LQ9NUG4 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.77■□□□□ 0.11
CCM2LQ9NUG4 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.77■□□□□ 0.11
CCM2LQ9NUG4 LINC02228-204ENST00000642115 2962 ntBASIC15.77■□□□□ 0.11
CCM2LQ9NUG4 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCM2LQ9NUG4 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.77■□□□□ 0.11
CCM2LQ9NUG4 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.77■□□□□ 0.11
CCM2LQ9NUG4 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCM2LQ9NUG4 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.77■□□□□ 0.11
CCM2LQ9NUG4 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.77■□□□□ 0.11
CCM2LQ9NUG4 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCM2LQ9NUG4 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.77■□□□□ 0.11
CCM2LQ9NUG4 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCM2LQ9NUG4 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.77■□□□□ 0.11
CCM2LQ9NUG4 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCM2LQ9NUG4 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCM2LQ9NUG4 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCM2LQ9NUG4 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.11
CCM2LQ9NUG4 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCM2LQ9NUG4 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.76■□□□□ 0.11
CCM2LQ9NUG4 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.76■□□□□ 0.11
CCM2LQ9NUG4 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCM2LQ9NUG4 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
CCM2LQ9NUG4 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCM2LQ9NUG4 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.76■□□□□ 0.11
CCM2LQ9NUG4 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.76■□□□□ 0.11
CCM2LQ9NUG4 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCM2LQ9NUG4 AC112504.1-201ENST00000623415 1841 ntBASIC15.76■□□□□ 0.11
CCM2LQ9NUG4 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCM2LQ9NUG4 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCM2LQ9NUG4 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCM2LQ9NUG4 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.76■□□□□ 0.11
CCM2LQ9NUG4 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC15.76■□□□□ 0.11
CCM2LQ9NUG4 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms