Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.14■□□□□ 0.18
CLK4Q9HAZ1 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
CLK4Q9HAZ1 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.18
CLK4Q9HAZ1 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
CLK4Q9HAZ1 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLK4Q9HAZ1 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLK4Q9HAZ1 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLK4Q9HAZ1 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLK4Q9HAZ1 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLK4Q9HAZ1 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLK4Q9HAZ1 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.14■□□□□ 0.17
CLK4Q9HAZ1 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
CLK4Q9HAZ1 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.14■□□□□ 0.17
CLK4Q9HAZ1 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.14■□□□□ 0.17
CLK4Q9HAZ1 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.14■□□□□ 0.17
CLK4Q9HAZ1 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.14■□□□□ 0.17
CLK4Q9HAZ1 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.14■□□□□ 0.17
CLK4Q9HAZ1 AL591424.1-201ENST00000442569 1213 ntBASIC16.14■□□□□ 0.17
CLK4Q9HAZ1 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.14■□□□□ 0.17
CLK4Q9HAZ1 AC108073.2-201ENST00000464002 357 ntBASIC16.14■□□□□ 0.17
CLK4Q9HAZ1 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.14■□□□□ 0.17
CLK4Q9HAZ1 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CLK4Q9HAZ1 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.14■□□□□ 0.17
CLK4Q9HAZ1 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.14■□□□□ 0.17
CLK4Q9HAZ1 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLK4Q9HAZ1 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLK4Q9HAZ1 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLK4Q9HAZ1 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CLK4Q9HAZ1 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.14■□□□□ 0.17
CLK4Q9HAZ1 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.14■□□□□ 0.17
CLK4Q9HAZ1 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
CLK4Q9HAZ1 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLK4Q9HAZ1 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLK4Q9HAZ1 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
CLK4Q9HAZ1 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLK4Q9HAZ1 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
CLK4Q9HAZ1 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLK4Q9HAZ1 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLK4Q9HAZ1 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLK4Q9HAZ1 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.14■□□□□ 0.17
CLK4Q9HAZ1 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
CLK4Q9HAZ1 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CLK4Q9HAZ1 AL021920.2-201ENST00000624828 1351 ntBASIC16.13■□□□□ 0.17
CLK4Q9HAZ1 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CLK4Q9HAZ1 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLK4Q9HAZ1 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLK4Q9HAZ1 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CLK4Q9HAZ1 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLK4Q9HAZ1 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.13■□□□□ 0.17
CLK4Q9HAZ1 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.13■□□□□ 0.17
CLK4Q9HAZ1 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLK4Q9HAZ1 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLK4Q9HAZ1 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CLK4Q9HAZ1 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
CLK4Q9HAZ1 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLK4Q9HAZ1 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLK4Q9HAZ1 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.13■□□□□ 0.17
CLK4Q9HAZ1 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLK4Q9HAZ1 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLK4Q9HAZ1 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.13■□□□□ 0.17
CLK4Q9HAZ1 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLK4Q9HAZ1 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLK4Q9HAZ1 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLK4Q9HAZ1 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.13■□□□□ 0.17
CLK4Q9HAZ1 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.13■□□□□ 0.17
CLK4Q9HAZ1 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.13■□□□□ 0.17
CLK4Q9HAZ1 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.13■□□□□ 0.17
CLK4Q9HAZ1 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CLK4Q9HAZ1 AC120114.3-201ENST00000611923 658 ntBASIC16.13■□□□□ 0.17
CLK4Q9HAZ1 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLK4Q9HAZ1 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLK4Q9HAZ1 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLK4Q9HAZ1 AC092053.1-201ENST00000605787 1936 ntBASIC16.13■□□□□ 0.17
CLK4Q9HAZ1 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.13■□□□□ 0.17
CLK4Q9HAZ1 FRMD8P1-201ENST00000440433 1524 ntBASIC16.13■□□□□ 0.17
CLK4Q9HAZ1 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.13■□□□□ 0.17
CLK4Q9HAZ1 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.13■□□□□ 0.17
CLK4Q9HAZ1 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CLK4Q9HAZ1 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.13■□□□□ 0.17
CLK4Q9HAZ1 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLK4Q9HAZ1 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.13■□□□□ 0.17
CLK4Q9HAZ1 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLK4Q9HAZ1 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLK4Q9HAZ1 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
CLK4Q9HAZ1 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLK4Q9HAZ1 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLK4Q9HAZ1 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLK4Q9HAZ1 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLK4Q9HAZ1 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.12■□□□□ 0.17
CLK4Q9HAZ1 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLK4Q9HAZ1 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLK4Q9HAZ1 CRYGEP-201ENST00000412192 528 ntBASIC16.12■□□□□ 0.17
CLK4Q9HAZ1 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.12■□□□□ 0.17
CLK4Q9HAZ1 VN2R19P-201ENST00000442399 1052 ntBASIC16.12■□□□□ 0.17
CLK4Q9HAZ1 AC087163.2-201ENST00000457299 853 ntBASIC16.12■□□□□ 0.17
CLK4Q9HAZ1 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLK4Q9HAZ1 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.12■□□□□ 0.17
CLK4Q9HAZ1 AC034105.1-201ENST00000563488 319 ntBASIC16.12■□□□□ 0.17
CLK4Q9HAZ1 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLK4Q9HAZ1 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms