Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC14.54□□□□□ -0.08
SLIRPQ9GZT3 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.54□□□□□ -0.08
SLIRPQ9GZT3 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC14.54□□□□□ -0.08
SLIRPQ9GZT3 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC14.54□□□□□ -0.08
SLIRPQ9GZT3 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC14.54□□□□□ -0.08
SLIRPQ9GZT3 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC14.54□□□□□ -0.08
SLIRPQ9GZT3 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLIRPQ9GZT3 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SLIRPQ9GZT3 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC14.54□□□□□ -0.08
SLIRPQ9GZT3 RPS20-210ENST00000523936 899 ntTSL 2 BASIC14.54□□□□□ -0.08
SLIRPQ9GZT3 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC14.54□□□□□ -0.08
SLIRPQ9GZT3 ADM-205ENST00000528544 586 ntTSL 2 BASIC14.54□□□□□ -0.08
SLIRPQ9GZT3 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC14.54□□□□□ -0.08
SLIRPQ9GZT3 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.54□□□□□ -0.08
SLIRPQ9GZT3 KRT8P39-201ENST00000396270 1433 ntBASIC14.54□□□□□ -0.08
SLIRPQ9GZT3 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLIRPQ9GZT3 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.54□□□□□ -0.08
SLIRPQ9GZT3 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC14.54□□□□□ -0.08
SLIRPQ9GZT3 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLIRPQ9GZT3 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.54□□□□□ -0.08
SLIRPQ9GZT3 GPAA1P2-202ENST00000606848 1787 ntBASIC14.54□□□□□ -0.08
SLIRPQ9GZT3 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SLIRPQ9GZT3 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.54□□□□□ -0.08
SLIRPQ9GZT3 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.54□□□□□ -0.08
SLIRPQ9GZT3 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLIRPQ9GZT3 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLIRPQ9GZT3 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLIRPQ9GZT3 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.54□□□□□ -0.08
SLIRPQ9GZT3 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.54□□□□□ -0.08
SLIRPQ9GZT3 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLIRPQ9GZT3 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SLIRPQ9GZT3 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLIRPQ9GZT3 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLIRPQ9GZT3 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLIRPQ9GZT3 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SLIRPQ9GZT3 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLIRPQ9GZT3 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SLIRPQ9GZT3 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
SLIRPQ9GZT3 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.53□□□□□ -0.08
SLIRPQ9GZT3 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLIRPQ9GZT3 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
SLIRPQ9GZT3 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.53□□□□□ -0.08
SLIRPQ9GZT3 AC090616.6-203ENST00000579186 1945 ntBASIC14.53□□□□□ -0.08
SLIRPQ9GZT3 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC14.53□□□□□ -0.08
SLIRPQ9GZT3 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLIRPQ9GZT3 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLIRPQ9GZT3 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.53□□□□□ -0.08
SLIRPQ9GZT3 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SLIRPQ9GZT3 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLIRPQ9GZT3 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLIRPQ9GZT3 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
SLIRPQ9GZT3 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.53□□□□□ -0.08
SLIRPQ9GZT3 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLIRPQ9GZT3 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLIRPQ9GZT3 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC14.53□□□□□ -0.08
SLIRPQ9GZT3 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC14.53□□□□□ -0.08
SLIRPQ9GZT3 AC034232.1-201ENST00000506026 1064 ntBASIC14.53□□□□□ -0.08
SLIRPQ9GZT3 AC104771.1-201ENST00000603335 964 ntBASIC14.53□□□□□ -0.08
SLIRPQ9GZT3 AC006058.3-201ENST00000606217 1069 ntBASIC14.53□□□□□ -0.08
SLIRPQ9GZT3 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
SLIRPQ9GZT3 LITAF-220ENST00000620789 692 ntTSL 5 BASIC14.53□□□□□ -0.08
SLIRPQ9GZT3 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.53□□□□□ -0.08
SLIRPQ9GZT3 AC015656.1-201ENST00000624209 3578 ntBASIC14.53□□□□□ -0.08
SLIRPQ9GZT3 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.53□□□□□ -0.08
SLIRPQ9GZT3 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLIRPQ9GZT3 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SLIRPQ9GZT3 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLIRPQ9GZT3 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLIRPQ9GZT3 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLIRPQ9GZT3 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.53□□□□□ -0.08
SLIRPQ9GZT3 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
SLIRPQ9GZT3 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.53□□□□□ -0.08
SLIRPQ9GZT3 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.53□□□□□ -0.08
SLIRPQ9GZT3 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SLIRPQ9GZT3 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
SLIRPQ9GZT3 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLIRPQ9GZT3 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLIRPQ9GZT3 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SLIRPQ9GZT3 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLIRPQ9GZT3 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SLIRPQ9GZT3 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.53□□□□□ -0.08
SLIRPQ9GZT3 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SLIRPQ9GZT3 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SLIRPQ9GZT3 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC14.52□□□□□ -0.08
SLIRPQ9GZT3 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SLIRPQ9GZT3 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
SLIRPQ9GZT3 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
SLIRPQ9GZT3 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SLIRPQ9GZT3 AC008677.1-201ENST00000519230 1561 ntBASIC14.52□□□□□ -0.08
SLIRPQ9GZT3 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.52□□□□□ -0.08
SLIRPQ9GZT3 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.52□□□□□ -0.08
SLIRPQ9GZT3 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SLIRPQ9GZT3 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.52□□□□□ -0.08
SLIRPQ9GZT3 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SLIRPQ9GZT3 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SLIRPQ9GZT3 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SLIRPQ9GZT3 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SLIRPQ9GZT3 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
SLIRPQ9GZT3 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SLIRPQ9GZT3 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms