Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 HLA-A-202ENST00000376806 1854 ntBASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 AD000864.1-201ENST00000624076 2295 ntBASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 DPM2-202ENST00000373110 738 ntTSL 2 BASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 TSSK5P-201ENST00000423978 907 ntBASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 GNAQP1-201ENST00000444815 1067 ntBASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 COX20P2-201ENST00000452636 358 ntBASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 KRT18P34-201ENST00000488218 1270 ntBASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 SATB1-217ENST00000493952 626 ntTSL 3 BASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 SERBP1P5-201ENST00000510079 1181 ntBASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 CFL1-212ENST00000531413 636 ntTSL 3 BASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 AQP6-203ENST00000551733 849 ntTSL 3 BASIC5.59□□□□□ -1.51
KRTAP4-3Q9BYR4 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms