Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHRDL1Q9BU40 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHRDL1Q9BU40 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC13.2□□□□□ -0.3
CHRDL1Q9BU40 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CHRDL1Q9BU40 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHRDL1Q9BU40 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
CHRDL1Q9BU40 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC13.2□□□□□ -0.3
CHRDL1Q9BU40 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC13.2□□□□□ -0.3
CHRDL1Q9BU40 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CHRDL1Q9BU40 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC13.2□□□□□ -0.3
CHRDL1Q9BU40 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC13.2□□□□□ -0.3
CHRDL1Q9BU40 DUX4L17-201ENST00000557360 1267 ntBASIC13.2□□□□□ -0.3
CHRDL1Q9BU40 IRF8-202ENST00000562492 946 ntTSL 3 BASIC13.2□□□□□ -0.3
CHRDL1Q9BU40 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
CHRDL1Q9BU40 AC139887.3-201ENST00000568585 713 ntBASIC13.2□□□□□ -0.3
CHRDL1Q9BU40 PAM16-208ENST00000573553 722 ntTSL 2 BASIC13.2□□□□□ -0.3
CHRDL1Q9BU40 SDCCAG3P1-201ENST00000589292 1150 ntBASIC13.2□□□□□ -0.3
CHRDL1Q9BU40 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC13.2□□□□□ -0.3
CHRDL1Q9BU40 AL139424.1-201ENST00000607572 797 ntBASIC13.2□□□□□ -0.3
CHRDL1Q9BU40 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
CHRDL1Q9BU40 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHRDL1Q9BU40 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHRDL1Q9BU40 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC13.2□□□□□ -0.3
CHRDL1Q9BU40 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHRDL1Q9BU40 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC13.2□□□□□ -0.3
CHRDL1Q9BU40 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
CHRDL1Q9BU40 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC13.2□□□□□ -0.3
CHRDL1Q9BU40 PCDHA3-202ENST00000532566 4594 ntBASIC13.2□□□□□ -0.3
CHRDL1Q9BU40 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHRDL1Q9BU40 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC13.2□□□□□ -0.3
CHRDL1Q9BU40 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHRDL1Q9BU40 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CHRDL1Q9BU40 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CHRDL1Q9BU40 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CHRDL1Q9BU40 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CHRDL1Q9BU40 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHRDL1Q9BU40 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
CHRDL1Q9BU40 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHRDL1Q9BU40 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CHRDL1Q9BU40 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
CHRDL1Q9BU40 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHRDL1Q9BU40 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHRDL1Q9BU40 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHRDL1Q9BU40 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CHRDL1Q9BU40 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CHRDL1Q9BU40 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
CHRDL1Q9BU40 AC105917.1-201ENST00000506637 2539 ntBASIC13.19□□□□□ -0.3
CHRDL1Q9BU40 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC13.19□□□□□ -0.3
CHRDL1Q9BU40 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHRDL1Q9BU40 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC13.19□□□□□ -0.3
CHRDL1Q9BU40 TUBB8P12-201ENST00000308911 1335 ntBASIC13.19□□□□□ -0.3
CHRDL1Q9BU40 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHRDL1Q9BU40 TUBB7P-202ENST00000428444 1305 ntBASIC13.19□□□□□ -0.3
CHRDL1Q9BU40 TUBB8P7-204ENST00000567960 1332 ntBASIC13.19□□□□□ -0.3
CHRDL1Q9BU40 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHRDL1Q9BU40 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CHRDL1Q9BU40 CES3-203ENST00000543856 3178 ntTSL 2 BASIC13.19□□□□□ -0.3
CHRDL1Q9BU40 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CHRDL1Q9BU40 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHRDL1Q9BU40 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHRDL1Q9BU40 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CHRDL1Q9BU40 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHRDL1Q9BU40 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC13.19□□□□□ -0.3
CHRDL1Q9BU40 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHRDL1Q9BU40 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHRDL1Q9BU40 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
CHRDL1Q9BU40 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC13.19□□□□□ -0.3
CHRDL1Q9BU40 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
CHRDL1Q9BU40 AC021087.4-201ENST00000563761 564 ntBASIC13.19□□□□□ -0.3
CHRDL1Q9BU40 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CHRDL1Q9BU40 AC025062.2-201ENST00000605477 670 ntBASIC13.19□□□□□ -0.3
CHRDL1Q9BU40 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHRDL1Q9BU40 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC13.19□□□□□ -0.3
CHRDL1Q9BU40 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CHRDL1Q9BU40 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CHRDL1Q9BU40 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CHRDL1Q9BU40 MYB-201ENST00000316528 3571 ntTSL 5 BASIC13.19□□□□□ -0.3
CHRDL1Q9BU40 MYB-241ENST00000616088 3573 ntTSL 5 BASIC13.19□□□□□ -0.3
CHRDL1Q9BU40 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC13.19□□□□□ -0.3
CHRDL1Q9BU40 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
CHRDL1Q9BU40 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHRDL1Q9BU40 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHRDL1Q9BU40 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC13.19□□□□□ -0.3
CHRDL1Q9BU40 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC13.19□□□□□ -0.3
CHRDL1Q9BU40 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHRDL1Q9BU40 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC13.19□□□□□ -0.3
CHRDL1Q9BU40 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHRDL1Q9BU40 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHRDL1Q9BU40 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHRDL1Q9BU40 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHRDL1Q9BU40 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHRDL1Q9BU40 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHRDL1Q9BU40 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHRDL1Q9BU40 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
CHRDL1Q9BU40 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHRDL1Q9BU40 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHRDL1Q9BU40 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHRDL1Q9BU40 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
CHRDL1Q9BU40 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CHRDL1Q9BU40 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms