Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
PCGF1Q9BSM1 FRMD6-AS1-201ENST00000617151 2229 ntBASIC13.92□□□□□ -0.18
PCGF1Q9BSM1 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PCGF1Q9BSM1 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
PCGF1Q9BSM1 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PCGF1Q9BSM1 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
PCGF1Q9BSM1 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
PCGF1Q9BSM1 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PCGF1Q9BSM1 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
PCGF1Q9BSM1 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC13.92□□□□□ -0.18
PCGF1Q9BSM1 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PCGF1Q9BSM1 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
PCGF1Q9BSM1 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
PCGF1Q9BSM1 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC13.92□□□□□ -0.18
PCGF1Q9BSM1 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PCGF1Q9BSM1 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PCGF1Q9BSM1 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PCGF1Q9BSM1 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PCGF1Q9BSM1 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PCGF1Q9BSM1 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PCGF1Q9BSM1 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PCGF1Q9BSM1 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PCGF1Q9BSM1 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PCGF1Q9BSM1 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
PCGF1Q9BSM1 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC13.91□□□□□ -0.18
PCGF1Q9BSM1 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PCGF1Q9BSM1 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
PCGF1Q9BSM1 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PCGF1Q9BSM1 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC13.91□□□□□ -0.18
PCGF1Q9BSM1 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
PCGF1Q9BSM1 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PCGF1Q9BSM1 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC13.91□□□□□ -0.18
PCGF1Q9BSM1 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC13.91□□□□□ -0.18
PCGF1Q9BSM1 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PCGF1Q9BSM1 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PCGF1Q9BSM1 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
PCGF1Q9BSM1 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
PCGF1Q9BSM1 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PCGF1Q9BSM1 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC13.91□□□□□ -0.18
PCGF1Q9BSM1 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PCGF1Q9BSM1 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PCGF1Q9BSM1 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PCGF1Q9BSM1 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
PCGF1Q9BSM1 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC13.91□□□□□ -0.18
PCGF1Q9BSM1 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC13.91□□□□□ -0.18
PCGF1Q9BSM1 FAM58CP-201ENST00000435741 640 ntBASIC13.91□□□□□ -0.18
PCGF1Q9BSM1 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PCGF1Q9BSM1 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC13.91□□□□□ -0.18
PCGF1Q9BSM1 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC13.91□□□□□ -0.18
PCGF1Q9BSM1 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC13.91□□□□□ -0.18
PCGF1Q9BSM1 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC13.91□□□□□ -0.18
PCGF1Q9BSM1 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC13.91□□□□□ -0.18
PCGF1Q9BSM1 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PCGF1Q9BSM1 MIR4469-201ENST00000583919 79 ntBASIC13.91□□□□□ -0.18
PCGF1Q9BSM1 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC13.91□□□□□ -0.18
PCGF1Q9BSM1 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC13.91□□□□□ -0.18
PCGF1Q9BSM1 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC13.91□□□□□ -0.18
PCGF1Q9BSM1 MED16-214ENST00000617672 554 ntTSL 5 BASIC13.91□□□□□ -0.18
PCGF1Q9BSM1 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
PCGF1Q9BSM1 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PCGF1Q9BSM1 PCDHB17P-201ENST00000539533 2393 ntBASIC13.91□□□□□ -0.18
PCGF1Q9BSM1 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC13.91□□□□□ -0.18
PCGF1Q9BSM1 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PCGF1Q9BSM1 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
PCGF1Q9BSM1 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PCGF1Q9BSM1 STX3-203ENST00000529177 1571 ntTSL 2 BASIC13.91□□□□□ -0.18
PCGF1Q9BSM1 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC13.91□□□□□ -0.18
PCGF1Q9BSM1 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PCGF1Q9BSM1 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PCGF1Q9BSM1 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
PCGF1Q9BSM1 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PCGF1Q9BSM1 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC13.9□□□□□ -0.18
PCGF1Q9BSM1 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PCGF1Q9BSM1 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
PCGF1Q9BSM1 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PCGF1Q9BSM1 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
PCGF1Q9BSM1 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PCGF1Q9BSM1 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PCGF1Q9BSM1 FRMD8P1-201ENST00000440433 1524 ntBASIC13.9□□□□□ -0.18
PCGF1Q9BSM1 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC13.9□□□□□ -0.18
PCGF1Q9BSM1 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
PCGF1Q9BSM1 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PCGF1Q9BSM1 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC13.9□□□□□ -0.18
PCGF1Q9BSM1 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PCGF1Q9BSM1 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
PCGF1Q9BSM1 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC13.9□□□□□ -0.18
PCGF1Q9BSM1 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PCGF1Q9BSM1 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
PCGF1Q9BSM1 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PCGF1Q9BSM1 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC13.9□□□□□ -0.18
PCGF1Q9BSM1 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
PCGF1Q9BSM1 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PCGF1Q9BSM1 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
PCGF1Q9BSM1 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC13.9□□□□□ -0.18
PCGF1Q9BSM1 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC13.9□□□□□ -0.18
PCGF1Q9BSM1 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC13.9□□□□□ -0.18
PCGF1Q9BSM1 CEND1P1-201ENST00000451006 455 ntBASIC13.9□□□□□ -0.18
PCGF1Q9BSM1 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC13.9□□□□□ -0.18
PCGF1Q9BSM1 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC13.9□□□□□ -0.18
PCGF1Q9BSM1 AP002490.2-201ENST00000524791 560 ntBASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms