Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
USB1Q9BQ65 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.86□□□□□ -0.03
USB1Q9BQ65 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
USB1Q9BQ65 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC14.86□□□□□ -0.03
USB1Q9BQ65 DOC2GP-204ENST00000639052 2548 ntBASIC14.86□□□□□ -0.03
USB1Q9BQ65 LINC02199-201ENST00000506655 2702 ntBASIC14.86□□□□□ -0.03
USB1Q9BQ65 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
USB1Q9BQ65 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.85□□□□□ -0.03
USB1Q9BQ65 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
USB1Q9BQ65 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
USB1Q9BQ65 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
USB1Q9BQ65 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
USB1Q9BQ65 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
USB1Q9BQ65 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
USB1Q9BQ65 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC14.85□□□□□ -0.03
USB1Q9BQ65 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
USB1Q9BQ65 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
USB1Q9BQ65 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
USB1Q9BQ65 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.85□□□□□ -0.03
USB1Q9BQ65 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
USB1Q9BQ65 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
USB1Q9BQ65 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
USB1Q9BQ65 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
USB1Q9BQ65 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
USB1Q9BQ65 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
USB1Q9BQ65 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC14.85□□□□□ -0.03
USB1Q9BQ65 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
USB1Q9BQ65 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
USB1Q9BQ65 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
USB1Q9BQ65 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.85□□□□□ -0.03
USB1Q9BQ65 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.85□□□□□ -0.03
USB1Q9BQ65 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.85□□□□□ -0.03
USB1Q9BQ65 FAM86C2P-203ENST00000528684 1004 ntBASIC14.85□□□□□ -0.03
USB1Q9BQ65 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
USB1Q9BQ65 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.85□□□□□ -0.03
USB1Q9BQ65 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.85□□□□□ -0.03
USB1Q9BQ65 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.85□□□□□ -0.03
USB1Q9BQ65 AC091167.2-201ENST00000579581 588 ntBASIC14.85□□□□□ -0.03
USB1Q9BQ65 ACTL9-202ENST00000612068 1252 ntBASIC14.85□□□□□ -0.03
USB1Q9BQ65 AP001350.2-201ENST00000625104 1094 ntBASIC14.85□□□□□ -0.03
USB1Q9BQ65 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.85□□□□□ -0.03
USB1Q9BQ65 AC092865.6-201ENST00000642101 219 ntBASIC14.85□□□□□ -0.03
USB1Q9BQ65 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
USB1Q9BQ65 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
USB1Q9BQ65 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
USB1Q9BQ65 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
USB1Q9BQ65 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
USB1Q9BQ65 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC14.85□□□□□ -0.03
USB1Q9BQ65 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
USB1Q9BQ65 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
USB1Q9BQ65 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
USB1Q9BQ65 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
USB1Q9BQ65 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
USB1Q9BQ65 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.85□□□□□ -0.03
USB1Q9BQ65 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
USB1Q9BQ65 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
USB1Q9BQ65 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
USB1Q9BQ65 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
USB1Q9BQ65 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
USB1Q9BQ65 ELL2P1-201ENST00000413990 1906 ntBASIC14.84□□□□□ -0.03
USB1Q9BQ65 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
USB1Q9BQ65 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
USB1Q9BQ65 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
USB1Q9BQ65 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
USB1Q9BQ65 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
USB1Q9BQ65 AL353732.1-201ENST00000569618 1459 ntBASIC14.84□□□□□ -0.03
USB1Q9BQ65 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.84□□□□□ -0.03
USB1Q9BQ65 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.84□□□□□ -0.03
USB1Q9BQ65 AC093525.9-201ENST00000624961 1746 ntBASIC14.84□□□□□ -0.03
USB1Q9BQ65 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
USB1Q9BQ65 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
USB1Q9BQ65 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
USB1Q9BQ65 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
USB1Q9BQ65 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.84□□□□□ -0.03
USB1Q9BQ65 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC14.84□□□□□ -0.03
USB1Q9BQ65 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.84□□□□□ -0.03
USB1Q9BQ65 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.84□□□□□ -0.03
USB1Q9BQ65 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
USB1Q9BQ65 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.84□□□□□ -0.03
USB1Q9BQ65 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.84□□□□□ -0.03
USB1Q9BQ65 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.84□□□□□ -0.03
USB1Q9BQ65 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.84□□□□□ -0.03
USB1Q9BQ65 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.84□□□□□ -0.03
USB1Q9BQ65 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
USB1Q9BQ65 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
USB1Q9BQ65 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.84□□□□□ -0.03
USB1Q9BQ65 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
USB1Q9BQ65 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
USB1Q9BQ65 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
USB1Q9BQ65 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
USB1Q9BQ65 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
USB1Q9BQ65 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
USB1Q9BQ65 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
USB1Q9BQ65 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
USB1Q9BQ65 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
USB1Q9BQ65 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
USB1Q9BQ65 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
USB1Q9BQ65 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
USB1Q9BQ65 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
USB1Q9BQ65 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms