Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ARID3AQ99856 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ARID3AQ99856 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.91■□□□□ 0.62
ARID3AQ99856 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.91■□□□□ 0.62
ARID3AQ99856 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ARID3AQ99856 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
ARID3AQ99856 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ARID3AQ99856 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ARID3AQ99856 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC18.91■□□□□ 0.62
ARID3AQ99856 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.91■□□□□ 0.62
ARID3AQ99856 RER1-203ENST00000378513 3000 ntTSL 3 BASIC18.91■□□□□ 0.62
ARID3AQ99856 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ARID3AQ99856 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ARID3AQ99856 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
ARID3AQ99856 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
ARID3AQ99856 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ARID3AQ99856 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
ARID3AQ99856 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ARID3AQ99856 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ARID3AQ99856 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ARID3AQ99856 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC18.91■□□□□ 0.62
ARID3AQ99856 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
ARID3AQ99856 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC18.9■□□□□ 0.62
ARID3AQ99856 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ARID3AQ99856 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
ARID3AQ99856 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ARID3AQ99856 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC18.9■□□□□ 0.62
ARID3AQ99856 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ARID3AQ99856 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ARID3AQ99856 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.9■□□□□ 0.62
ARID3AQ99856 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
ARID3AQ99856 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
ARID3AQ99856 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ARID3AQ99856 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
ARID3AQ99856 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ARID3AQ99856 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.9■□□□□ 0.62
ARID3AQ99856 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ARID3AQ99856 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ARID3AQ99856 NUS1P2-201ENST00000417358 873 ntBASIC18.9■□□□□ 0.62
ARID3AQ99856 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.9■□□□□ 0.62
ARID3AQ99856 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.9■□□□□ 0.62
ARID3AQ99856 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ARID3AQ99856 AC012313.10-201ENST00000623509 926 ntBASIC18.9■□□□□ 0.62
ARID3AQ99856 LINC01451-201ENST00000623792 534 ntBASIC18.9■□□□□ 0.62
ARID3AQ99856 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ARID3AQ99856 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ARID3AQ99856 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
ARID3AQ99856 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ARID3AQ99856 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ARID3AQ99856 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
ARID3AQ99856 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ARID3AQ99856 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ARID3AQ99856 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC18.89■□□□□ 0.62
ARID3AQ99856 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.62
ARID3AQ99856 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
ARID3AQ99856 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC18.89■□□□□ 0.62
ARID3AQ99856 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
ARID3AQ99856 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ARID3AQ99856 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ARID3AQ99856 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ARID3AQ99856 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ARID3AQ99856 FAM220CP-201ENST00000395253 831 ntBASIC18.89■□□□□ 0.61
ARID3AQ99856 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ARID3AQ99856 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
ARID3AQ99856 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
ARID3AQ99856 FOSL1P1-201ENST00000511041 816 ntBASIC18.89■□□□□ 0.61
ARID3AQ99856 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.89■□□□□ 0.61
ARID3AQ99856 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.89■□□□□ 0.61
ARID3AQ99856 AC114341.1-201ENST00000618070 349 ntBASIC18.89■□□□□ 0.61
ARID3AQ99856 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.89■□□□□ 0.61
ARID3AQ99856 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ARID3AQ99856 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
ARID3AQ99856 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
ARID3AQ99856 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ARID3AQ99856 TNRC18P2-201ENST00000417666 2714 ntBASIC18.89■□□□□ 0.61
ARID3AQ99856 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ARID3AQ99856 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ARID3AQ99856 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ARID3AQ99856 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ARID3AQ99856 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ARID3AQ99856 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ARID3AQ99856 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.89■□□□□ 0.61
ARID3AQ99856 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ARID3AQ99856 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ARID3AQ99856 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.89■□□□□ 0.61
ARID3AQ99856 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ARID3AQ99856 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ARID3AQ99856 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.88■□□□□ 0.61
ARID3AQ99856 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ARID3AQ99856 AC015656.1-201ENST00000624209 3578 ntBASIC18.88■□□□□ 0.61
ARID3AQ99856 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.88■□□□□ 0.61
ARID3AQ99856 INTS4P1-201ENST00000438455 1935 ntBASIC18.88■□□□□ 0.61
ARID3AQ99856 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC18.88■□□□□ 0.61
ARID3AQ99856 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ARID3AQ99856 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ARID3AQ99856 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC18.88■□□□□ 0.61
ARID3AQ99856 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.88■□□□□ 0.61
ARID3AQ99856 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ARID3AQ99856 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ARID3AQ99856 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms