Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TM9SF2Q99805 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TM9SF2Q99805 MRPL20P1-201ENST00000400819 433 ntBASIC15.41■□□□□ 0.06
TM9SF2Q99805 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.41■□□□□ 0.06
TM9SF2Q99805 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.41■□□□□ 0.06
TM9SF2Q99805 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.41■□□□□ 0.06
TM9SF2Q99805 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.41■□□□□ 0.06
TM9SF2Q99805 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.41■□□□□ 0.06
TM9SF2Q99805 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.41■□□□□ 0.06
TM9SF2Q99805 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
TM9SF2Q99805 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TM9SF2Q99805 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TM9SF2Q99805 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.41■□□□□ 0.06
TM9SF2Q99805 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
TM9SF2Q99805 FLJ16779-201ENST00000612722 7638 ntBASIC15.41■□□□□ 0.06
TM9SF2Q99805 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
TM9SF2Q99805 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
TM9SF2Q99805 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.41■□□□□ 0.06
TM9SF2Q99805 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TM9SF2Q99805 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.4■□□□□ 0.06
TM9SF2Q99805 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TM9SF2Q99805 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TM9SF2Q99805 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TM9SF2Q99805 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TM9SF2Q99805 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TM9SF2Q99805 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TM9SF2Q99805 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TM9SF2Q99805 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.4■□□□□ 0.06
TM9SF2Q99805 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TM9SF2Q99805 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
TM9SF2Q99805 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TM9SF2Q99805 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TM9SF2Q99805 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TM9SF2Q99805 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TM9SF2Q99805 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TM9SF2Q99805 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.4■□□□□ 0.06
TM9SF2Q99805 PTCHD3P3-201ENST00000403073 906 ntBASIC15.4■□□□□ 0.06
TM9SF2Q99805 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.4■□□□□ 0.06
TM9SF2Q99805 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TM9SF2Q99805 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.4■□□□□ 0.06
TM9SF2Q99805 VN2R19P-201ENST00000442399 1052 ntBASIC15.4■□□□□ 0.06
TM9SF2Q99805 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.4■□□□□ 0.06
TM9SF2Q99805 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.4■□□□□ 0.06
TM9SF2Q99805 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.4■□□□□ 0.06
TM9SF2Q99805 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.4■□□□□ 0.06
TM9SF2Q99805 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TM9SF2Q99805 MIR3687-2-201ENST00000577708 61 ntBASIC15.4■□□□□ 0.06
TM9SF2Q99805 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.4■□□□□ 0.06
TM9SF2Q99805 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.4■□□□□ 0.06
TM9SF2Q99805 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.4■□□□□ 0.06
TM9SF2Q99805 MIR3687-1-201ENST00000614492 61 ntBASIC15.4■□□□□ 0.06
TM9SF2Q99805 AC139530.3-201ENST00000620344 690 ntBASIC15.4■□□□□ 0.06
TM9SF2Q99805 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TM9SF2Q99805 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TM9SF2Q99805 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TM9SF2Q99805 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TM9SF2Q99805 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
TM9SF2Q99805 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TM9SF2Q99805 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TM9SF2Q99805 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TM9SF2Q99805 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TM9SF2Q99805 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.4■□□□□ 0.06
TM9SF2Q99805 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.4■□□□□ 0.06
TM9SF2Q99805 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TM9SF2Q99805 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.4■□□□□ 0.06
TM9SF2Q99805 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.4■□□□□ 0.06
TM9SF2Q99805 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
TM9SF2Q99805 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TM9SF2Q99805 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TM9SF2Q99805 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TM9SF2Q99805 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.39■□□□□ 0.05
TM9SF2Q99805 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.39■□□□□ 0.05
TM9SF2Q99805 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.39■□□□□ 0.05
TM9SF2Q99805 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TM9SF2Q99805 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TM9SF2Q99805 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TM9SF2Q99805 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TM9SF2Q99805 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TM9SF2Q99805 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
TM9SF2Q99805 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TM9SF2Q99805 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TM9SF2Q99805 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TM9SF2Q99805 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TM9SF2Q99805 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TM9SF2Q99805 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.39■□□□□ 0.05
TM9SF2Q99805 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.39■□□□□ 0.05
TM9SF2Q99805 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TM9SF2Q99805 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.39■□□□□ 0.05
TM9SF2Q99805 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.39■□□□□ 0.05
TM9SF2Q99805 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.39■□□□□ 0.05
TM9SF2Q99805 AC010654.1-201ENST00000615722 808 ntBASIC15.39■□□□□ 0.05
TM9SF2Q99805 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.39■□□□□ 0.05
TM9SF2Q99805 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TM9SF2Q99805 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TM9SF2Q99805 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TM9SF2Q99805 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.39■□□□□ 0.05
TM9SF2Q99805 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
TM9SF2Q99805 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TM9SF2Q99805 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.39■□□□□ 0.05
TM9SF2Q99805 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms