Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CDX2Q99626 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC16.96■□□□□ 0.3
CDX2Q99626 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CDX2Q99626 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC16.95■□□□□ 0.3
CDX2Q99626 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDX2Q99626 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.95■□□□□ 0.3
CDX2Q99626 WIZP1-201ENST00000531444 2299 ntBASIC16.95■□□□□ 0.3
CDX2Q99626 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CDX2Q99626 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.95■□□□□ 0.3
CDX2Q99626 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CDX2Q99626 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDX2Q99626 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC16.95■□□□□ 0.3
CDX2Q99626 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC16.95■□□□□ 0.3
CDX2Q99626 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CDX2Q99626 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC16.95■□□□□ 0.3
CDX2Q99626 FAM197Y7-201ENST00000432892 766 ntBASIC16.95■□□□□ 0.3
CDX2Q99626 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDX2Q99626 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC16.95■□□□□ 0.3
CDX2Q99626 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.95■□□□□ 0.3
CDX2Q99626 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.95■□□□□ 0.3
CDX2Q99626 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC16.95■□□□□ 0.3
CDX2Q99626 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC16.95■□□□□ 0.3
CDX2Q99626 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDX2Q99626 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDX2Q99626 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDX2Q99626 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDX2Q99626 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDX2Q99626 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.95■□□□□ 0.3
CDX2Q99626 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDX2Q99626 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDX2Q99626 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CDX2Q99626 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDX2Q99626 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDX2Q99626 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDX2Q99626 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CDX2Q99626 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDX2Q99626 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.95■□□□□ 0.3
CDX2Q99626 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDX2Q99626 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDX2Q99626 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDX2Q99626 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CDX2Q99626 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDX2Q99626 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.94■□□□□ 0.3
CDX2Q99626 CYP4F24P-201ENST00000586049 1580 ntBASIC16.94■□□□□ 0.3
CDX2Q99626 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.94■□□□□ 0.3
CDX2Q99626 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDX2Q99626 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDX2Q99626 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDX2Q99626 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC16.94■□□□□ 0.3
CDX2Q99626 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDX2Q99626 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CDX2Q99626 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDX2Q99626 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CDX2Q99626 VDAC1P7-201ENST00000462417 847 ntBASIC16.94■□□□□ 0.3
CDX2Q99626 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDX2Q99626 COX5BP1-201ENST00000507622 393 ntBASIC16.94■□□□□ 0.3
CDX2Q99626 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC16.94■□□□□ 0.3
CDX2Q99626 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDX2Q99626 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.94■□□□□ 0.3
CDX2Q99626 AC138951.2-201ENST00000623455 1161 ntBASIC16.94■□□□□ 0.3
CDX2Q99626 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDX2Q99626 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDX2Q99626 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDX2Q99626 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDX2Q99626 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CDX2Q99626 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDX2Q99626 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.94■□□□□ 0.3
CDX2Q99626 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDX2Q99626 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDX2Q99626 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
CDX2Q99626 KRT8P39-201ENST00000396270 1433 ntBASIC16.94■□□□□ 0.3
CDX2Q99626 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC16.94■□□□□ 0.3
CDX2Q99626 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDX2Q99626 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDX2Q99626 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDX2Q99626 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDX2Q99626 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.94■□□□□ 0.3
CDX2Q99626 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDX2Q99626 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDX2Q99626 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC16.93■□□□□ 0.3
CDX2Q99626 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC16.93■□□□□ 0.3
CDX2Q99626 AL136982.4-201ENST00000437689 1740 ntBASIC16.93■□□□□ 0.3
CDX2Q99626 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC16.93■□□□□ 0.3
CDX2Q99626 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CDX2Q99626 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDX2Q99626 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDX2Q99626 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDX2Q99626 SLC25A1P3-201ENST00000395415 828 ntBASIC16.93■□□□□ 0.3
CDX2Q99626 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDX2Q99626 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC16.93■□□□□ 0.3
CDX2Q99626 AC126915.1-201ENST00000522847 1038 ntBASIC16.93■□□□□ 0.3
CDX2Q99626 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.93■□□□□ 0.3
CDX2Q99626 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC16.93■□□□□ 0.3
CDX2Q99626 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDX2Q99626 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC16.93■□□□□ 0.3
CDX2Q99626 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC16.93■□□□□ 0.3
CDX2Q99626 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.93■□□□□ 0.3
CDX2Q99626 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.93■□□□□ 0.3
CDX2Q99626 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC16.93■□□□□ 0.3
CDX2Q99626 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms