Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.63■□□□□ 0.25
NDNQ99608 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.63■□□□□ 0.25
NDNQ99608 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NDNQ99608 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
NDNQ99608 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NDNQ99608 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NDNQ99608 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NDNQ99608 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NDNQ99608 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC16.63■□□□□ 0.25
NDNQ99608 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NDNQ99608 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
NDNQ99608 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
NDNQ99608 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NDNQ99608 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
NDNQ99608 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NDNQ99608 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NDNQ99608 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
NDNQ99608 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NDNQ99608 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NDNQ99608 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
NDNQ99608 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NDNQ99608 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.62■□□□□ 0.25
NDNQ99608 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.62■□□□□ 0.25
NDNQ99608 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.62■□□□□ 0.25
NDNQ99608 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.62■□□□□ 0.25
NDNQ99608 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
NDNQ99608 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
NDNQ99608 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.62■□□□□ 0.25
NDNQ99608 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.62■□□□□ 0.25
NDNQ99608 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NDNQ99608 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
NDNQ99608 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.62■□□□□ 0.25
NDNQ99608 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.62■□□□□ 0.25
NDNQ99608 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.62■□□□□ 0.25
NDNQ99608 CYP2A7P1-201ENST00000595391 815 ntBASIC16.62■□□□□ 0.25
NDNQ99608 AL049840.3-201ENST00000602669 611 ntBASIC16.62■□□□□ 0.25
NDNQ99608 GGTLC5P-201ENST00000617623 998 ntBASIC16.62■□□□□ 0.25
NDNQ99608 AL031008.1-201ENST00000619963 541 ntBASIC16.62■□□□□ 0.25
NDNQ99608 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NDNQ99608 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.62■□□□□ 0.25
NDNQ99608 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
NDNQ99608 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NDNQ99608 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.62■□□□□ 0.25
NDNQ99608 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NDNQ99608 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NDNQ99608 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NDNQ99608 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
NDNQ99608 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
NDNQ99608 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NDNQ99608 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NDNQ99608 GGT4P-201ENST00000623672 1708 ntBASIC16.62■□□□□ 0.25
NDNQ99608 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NDNQ99608 KRT8P39-201ENST00000396270 1433 ntBASIC16.62■□□□□ 0.25
NDNQ99608 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.62■□□□□ 0.25
NDNQ99608 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NDNQ99608 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NDNQ99608 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NDNQ99608 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.61■□□□□ 0.25
NDNQ99608 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NDNQ99608 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NDNQ99608 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.61■□□□□ 0.25
NDNQ99608 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NDNQ99608 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.61■□□□□ 0.25
NDNQ99608 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.61■□□□□ 0.25
NDNQ99608 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.61■□□□□ 0.25
NDNQ99608 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.61■□□□□ 0.25
NDNQ99608 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.61■□□□□ 0.25
NDNQ99608 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
NDNQ99608 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
NDNQ99608 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
NDNQ99608 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.61■□□□□ 0.25
NDNQ99608 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NDNQ99608 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.61■□□□□ 0.25
NDNQ99608 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NDNQ99608 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.61■□□□□ 0.25
NDNQ99608 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
NDNQ99608 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.61■□□□□ 0.25
NDNQ99608 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.61■□□□□ 0.25
NDNQ99608 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.61■□□□□ 0.25
NDNQ99608 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
NDNQ99608 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.61■□□□□ 0.25
NDNQ99608 FAM215A-202ENST00000632077 792 ntBASIC16.61■□□□□ 0.25
NDNQ99608 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.61■□□□□ 0.25
NDNQ99608 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NDNQ99608 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.61■□□□□ 0.25
NDNQ99608 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NDNQ99608 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NDNQ99608 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NDNQ99608 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NDNQ99608 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NDNQ99608 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
NDNQ99608 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.61■□□□□ 0.25
NDNQ99608 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NDNQ99608 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NDNQ99608 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
NDNQ99608 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NDNQ99608 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NDNQ99608 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NDNQ99608 AL353732.1-201ENST00000569618 1459 ntBASIC16.61■□□□□ 0.25
NDNQ99608 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms