Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HMCN1Q96RW7 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
HMCN1Q96RW7 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
HMCN1Q96RW7 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HMCN1Q96RW7 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
HMCN1Q96RW7 PGAP2-207ENST00000463452 931 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
HMCN1Q96RW7 AC024293.1-201ENST00000467930 498 ntBASIC4.89□□□□□ -1.63
HMCN1Q96RW7 RPL13AP25-201ENST00000484130 612 ntBASIC4.89□□□□□ -1.63
HMCN1Q96RW7 ALG1L6P-201ENST00000515248 758 ntBASIC4.89□□□□□ -1.63
HMCN1Q96RW7 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC4.89□□□□□ -1.63
HMCN1Q96RW7 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HMCN1Q96RW7 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HMCN1Q96RW7 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HMCN1Q96RW7 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
HMCN1Q96RW7 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HMCN1Q96RW7 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC4.89□□□□□ -1.63
HMCN1Q96RW7 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
HMCN1Q96RW7 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
HMCN1Q96RW7 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
HMCN1Q96RW7 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
HMCN1Q96RW7 REXO1L11P-201ENST00000620964 1927 ntBASIC4.89□□□□□ -1.63
HMCN1Q96RW7 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HMCN1Q96RW7 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
HMCN1Q96RW7 AF274858.1-201ENST00000406288 372 ntBASIC4.89□□□□□ -1.63
HMCN1Q96RW7 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC4.89□□□□□ -1.63
HMCN1Q96RW7 AC018463.1-201ENST00000456674 917 ntBASIC4.89□□□□□ -1.63
HMCN1Q96RW7 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC4.89□□□□□ -1.63
HMCN1Q96RW7 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC4.89□□□□□ -1.63
HMCN1Q96RW7 AC061975.2-201ENST00000581722 295 ntBASIC4.89□□□□□ -1.63
HMCN1Q96RW7 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC4.89□□□□□ -1.63
HMCN1Q96RW7 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC4.89□□□□□ -1.63
HMCN1Q96RW7 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
HMCN1Q96RW7 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HMCN1Q96RW7 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
HMCN1Q96RW7 Z97205.2-201ENST00000564697 1639 ntBASIC4.89□□□□□ -1.63
HMCN1Q96RW7 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC4.89□□□□□ -1.63
HMCN1Q96RW7 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HMCN1Q96RW7 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HMCN1Q96RW7 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HMCN1Q96RW7 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC4.89□□□□□ -1.63
HMCN1Q96RW7 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC4.89□□□□□ -1.63
HMCN1Q96RW7 AMT-204ENST00000427987 1646 ntTSL 5 BASIC4.89□□□□□ -1.63
HMCN1Q96RW7 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
HMCN1Q96RW7 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HMCN1Q96RW7 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HMCN1Q96RW7 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC4.89□□□□□ -1.63
HMCN1Q96RW7 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HMCN1Q96RW7 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HMCN1Q96RW7 PGGT1BP2-201ENST00000398621 1028 ntBASIC4.89□□□□□ -1.63
HMCN1Q96RW7 FAM197Y6-201ENST00000420524 766 ntBASIC4.89□□□□□ -1.63
HMCN1Q96RW7 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
HMCN1Q96RW7 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC4.89□□□□□ -1.63
HMCN1Q96RW7 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC4.89□□□□□ -1.63
HMCN1Q96RW7 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
HMCN1Q96RW7 NCK2-206ENST00000522586 490 ntTSL 5 BASIC4.89□□□□□ -1.63
HMCN1Q96RW7 MPDU1-223ENST00000582151 728 ntBASIC4.89□□□□□ -1.63
HMCN1Q96RW7 AC016590.1-201ENST00000588763 420 ntTSL 2 BASIC4.89□□□□□ -1.63
HMCN1Q96RW7 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC4.89□□□□□ -1.63
HMCN1Q96RW7 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
HMCN1Q96RW7 CSH2-207ENST00000613718 666 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HMCN1Q96RW7 AC007718.1-201ENST00000621078 280 ntBASIC4.89□□□□□ -1.63
HMCN1Q96RW7 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC4.89□□□□□ -1.63
HMCN1Q96RW7 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HMCN1Q96RW7 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HMCN1Q96RW7 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC4.89□□□□□ -1.63
HMCN1Q96RW7 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC4.89□□□□□ -1.63
HMCN1Q96RW7 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HMCN1Q96RW7 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
HMCN1Q96RW7 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HMCN1Q96RW7 MIR1202-201ENST00000408529 83 ntBASIC4.88□□□□□ -1.63
HMCN1Q96RW7 TISP43-201ENST00000409793 538 ntTSL 4 BASIC4.88□□□□□ -1.63
HMCN1Q96RW7 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC4.88□□□□□ -1.63
HMCN1Q96RW7 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
HMCN1Q96RW7 AREG-202ENST00000502307 956 ntTSL 5 BASIC4.88□□□□□ -1.63
HMCN1Q96RW7 CACNA1C-IT3-201ENST00000542680 622 ntTSL 3 BASIC4.88□□□□□ -1.63
HMCN1Q96RW7 KRT127P-201ENST00000547183 433 ntBASIC4.88□□□□□ -1.63
HMCN1Q96RW7 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
HMCN1Q96RW7 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC4.88□□□□□ -1.63
HMCN1Q96RW7 NAP1L6-202ENST00000641404 1222 ntBASIC4.88□□□□□ -1.63
HMCN1Q96RW7 CAP2P1-201ENST00000557743 1390 ntBASIC4.88□□□□□ -1.63
HMCN1Q96RW7 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
HMCN1Q96RW7 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HMCN1Q96RW7 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
HMCN1Q96RW7 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HMCN1Q96RW7 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
HMCN1Q96RW7 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
HMCN1Q96RW7 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HMCN1Q96RW7 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HMCN1Q96RW7 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HMCN1Q96RW7 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HMCN1Q96RW7 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC4.88□□□□□ -1.63
HMCN1Q96RW7 ZBTB45P2-201ENST00000452245 1531 ntBASIC4.88□□□□□ -1.63
HMCN1Q96RW7 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC4.88□□□□□ -1.63
HMCN1Q96RW7 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC4.88□□□□□ -1.63
HMCN1Q96RW7 LINC01006-201ENST00000333319 2292 ntBASIC4.88□□□□□ -1.63
HMCN1Q96RW7 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC4.88□□□□□ -1.63
HMCN1Q96RW7 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
HMCN1Q96RW7 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HMCN1Q96RW7 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HMCN1Q96RW7 AL138709.1-201ENST00000614840 1693 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms