Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ZNF48Q96MX3 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC13.44□□□□□ -0.26
ZNF48Q96MX3 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ZNF48Q96MX3 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
ZNF48Q96MX3 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ZNF48Q96MX3 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ZNF48Q96MX3 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
ZNF48Q96MX3 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ZNF48Q96MX3 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ZNF48Q96MX3 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ZNF48Q96MX3 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
ZNF48Q96MX3 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC13.44□□□□□ -0.26
ZNF48Q96MX3 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.44□□□□□ -0.26
ZNF48Q96MX3 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ZNF48Q96MX3 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC13.44□□□□□ -0.26
ZNF48Q96MX3 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ZNF48Q96MX3 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC13.44□□□□□ -0.26
ZNF48Q96MX3 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC13.44□□□□□ -0.26
ZNF48Q96MX3 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ZNF48Q96MX3 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC13.44□□□□□ -0.26
ZNF48Q96MX3 CDK2AP2P3-201ENST00000422476 372 ntBASIC13.44□□□□□ -0.26
ZNF48Q96MX3 HNRNPA1P40-201ENST00000426371 1278 ntBASIC13.44□□□□□ -0.26
ZNF48Q96MX3 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC13.44□□□□□ -0.26
ZNF48Q96MX3 AC002472.2-201ENST00000442739 958 ntBASIC13.44□□□□□ -0.26
ZNF48Q96MX3 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ZNF48Q96MX3 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC13.44□□□□□ -0.26
ZNF48Q96MX3 TSPY16P-201ENST00000449843 468 ntBASIC13.44□□□□□ -0.26
ZNF48Q96MX3 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC13.44□□□□□ -0.26
ZNF48Q96MX3 TAF8-206ENST00000472818 719 ntTSL 2 BASIC13.44□□□□□ -0.26
ZNF48Q96MX3 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC13.44□□□□□ -0.26
ZNF48Q96MX3 AC097493.3-201ENST00000509725 367 ntBASIC13.44□□□□□ -0.26
ZNF48Q96MX3 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
ZNF48Q96MX3 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
ZNF48Q96MX3 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC13.44□□□□□ -0.26
ZNF48Q96MX3 RN7SL204P-201ENST00000582831 262 ntBASIC13.44□□□□□ -0.26
ZNF48Q96MX3 NKG7-205ENST00000600427 520 ntTSL 3 BASIC13.44□□□□□ -0.26
ZNF48Q96MX3 AC239800.4-201ENST00000603712 296 ntBASIC13.44□□□□□ -0.26
ZNF48Q96MX3 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC13.44□□□□□ -0.26
ZNF48Q96MX3 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
ZNF48Q96MX3 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC13.44□□□□□ -0.26
ZNF48Q96MX3 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ZNF48Q96MX3 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ZNF48Q96MX3 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
ZNF48Q96MX3 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ZNF48Q96MX3 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
ZNF48Q96MX3 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ZNF48Q96MX3 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
ZNF48Q96MX3 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC13.44□□□□□ -0.26
ZNF48Q96MX3 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC13.44□□□□□ -0.26
ZNF48Q96MX3 AC105020.1-201ENST00000435356 2205 ntBASIC13.44□□□□□ -0.26
ZNF48Q96MX3 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ZNF48Q96MX3 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ZNF48Q96MX3 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ZNF48Q96MX3 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ZNF48Q96MX3 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ZNF48Q96MX3 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ZNF48Q96MX3 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ZNF48Q96MX3 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC13.44□□□□□ -0.26
ZNF48Q96MX3 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ZNF48Q96MX3 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ZNF48Q96MX3 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF48Q96MX3 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF48Q96MX3 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF48Q96MX3 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF48Q96MX3 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF48Q96MX3 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.43□□□□□ -0.26
ZNF48Q96MX3 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC13.43□□□□□ -0.26
ZNF48Q96MX3 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF48Q96MX3 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC13.43□□□□□ -0.26
ZNF48Q96MX3 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF48Q96MX3 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF48Q96MX3 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF48Q96MX3 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC13.43□□□□□ -0.26
ZNF48Q96MX3 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF48Q96MX3 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF48Q96MX3 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
ZNF48Q96MX3 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF48Q96MX3 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF48Q96MX3 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC13.43□□□□□ -0.26
ZNF48Q96MX3 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC13.43□□□□□ -0.26
ZNF48Q96MX3 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
ZNF48Q96MX3 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC13.43□□□□□ -0.26
ZNF48Q96MX3 SLC9A3P2-201ENST00000447821 2021 ntBASIC13.43□□□□□ -0.26
ZNF48Q96MX3 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF48Q96MX3 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC13.43□□□□□ -0.26
ZNF48Q96MX3 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC13.43□□□□□ -0.26
ZNF48Q96MX3 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC13.43□□□□□ -0.26
ZNF48Q96MX3 AC069120.2-201ENST00000524091 540 ntBASIC13.43□□□□□ -0.26
ZNF48Q96MX3 AP002490.2-201ENST00000524791 560 ntBASIC13.43□□□□□ -0.26
ZNF48Q96MX3 STX3-203ENST00000529177 1571 ntTSL 2 BASIC13.43□□□□□ -0.26
ZNF48Q96MX3 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC13.43□□□□□ -0.26
ZNF48Q96MX3 MIR4492-201ENST00000581627 80 ntBASIC13.43□□□□□ -0.26
ZNF48Q96MX3 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC13.43□□□□□ -0.26
ZNF48Q96MX3 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF48Q96MX3 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC13.43□□□□□ -0.26
ZNF48Q96MX3 AL158211.3-201ENST00000607385 239 ntBASIC13.43□□□□□ -0.26
ZNF48Q96MX3 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC13.43□□□□□ -0.26
ZNF48Q96MX3 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
ZNF48Q96MX3 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
ZNF48Q96MX3 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms