Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHMP6Q96FZ7 CICP13-201ENST00000422015 2789 ntBASIC16.7■□□□□ 0.26
CHMP6Q96FZ7 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHMP6Q96FZ7 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CHMP6Q96FZ7 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHMP6Q96FZ7 AC016027.1-202ENST00000607927 1699 ntBASIC16.7■□□□□ 0.26
CHMP6Q96FZ7 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CHMP6Q96FZ7 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHMP6Q96FZ7 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.7■□□□□ 0.26
CHMP6Q96FZ7 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHMP6Q96FZ7 HBZP1-201ENST00000354915 429 ntBASIC16.7■□□□□ 0.26
CHMP6Q96FZ7 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CHMP6Q96FZ7 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CHMP6Q96FZ7 STK19B-204ENST00000512515 211 ntBASIC16.7■□□□□ 0.26
CHMP6Q96FZ7 VENTXP5-201ENST00000523979 775 ntBASIC16.7■□□□□ 0.26
CHMP6Q96FZ7 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHMP6Q96FZ7 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.7■□□□□ 0.26
CHMP6Q96FZ7 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.7■□□□□ 0.26
CHMP6Q96FZ7 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.7■□□□□ 0.26
CHMP6Q96FZ7 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
CHMP6Q96FZ7 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHMP6Q96FZ7 SNX18-202ENST00000343017 3140 ntBASIC16.7■□□□□ 0.26
CHMP6Q96FZ7 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.7■□□□□ 0.26
CHMP6Q96FZ7 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHMP6Q96FZ7 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHMP6Q96FZ7 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.7■□□□□ 0.26
CHMP6Q96FZ7 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHMP6Q96FZ7 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHMP6Q96FZ7 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CHMP6Q96FZ7 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CHMP6Q96FZ7 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.7■□□□□ 0.26
CHMP6Q96FZ7 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CHMP6Q96FZ7 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CHMP6Q96FZ7 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP6Q96FZ7 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CHMP6Q96FZ7 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
CHMP6Q96FZ7 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP6Q96FZ7 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.69■□□□□ 0.26
CHMP6Q96FZ7 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.69■□□□□ 0.26
CHMP6Q96FZ7 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CHMP6Q96FZ7 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP6Q96FZ7 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP6Q96FZ7 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP6Q96FZ7 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CHMP6Q96FZ7 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CHMP6Q96FZ7 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP6Q96FZ7 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP6Q96FZ7 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP6Q96FZ7 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP6Q96FZ7 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.69■□□□□ 0.26
CHMP6Q96FZ7 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP6Q96FZ7 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.69■□□□□ 0.26
CHMP6Q96FZ7 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP6Q96FZ7 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.69■□□□□ 0.26
CHMP6Q96FZ7 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.69■□□□□ 0.26
CHMP6Q96FZ7 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.69■□□□□ 0.26
CHMP6Q96FZ7 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP6Q96FZ7 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.69■□□□□ 0.26
CHMP6Q96FZ7 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC16.69■□□□□ 0.26
CHMP6Q96FZ7 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP6Q96FZ7 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP6Q96FZ7 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.69■□□□□ 0.26
CHMP6Q96FZ7 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP6Q96FZ7 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP6Q96FZ7 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP6Q96FZ7 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP6Q96FZ7 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.69■□□□□ 0.26
CHMP6Q96FZ7 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP6Q96FZ7 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP6Q96FZ7 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
CHMP6Q96FZ7 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP6Q96FZ7 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CHMP6Q96FZ7 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP6Q96FZ7 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
CHMP6Q96FZ7 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC16.68■□□□□ 0.26
CHMP6Q96FZ7 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.68■□□□□ 0.26
CHMP6Q96FZ7 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP6Q96FZ7 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.68■□□□□ 0.26
CHMP6Q96FZ7 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC16.68■□□□□ 0.26
CHMP6Q96FZ7 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP6Q96FZ7 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.68■□□□□ 0.26
CHMP6Q96FZ7 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP6Q96FZ7 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.68■□□□□ 0.26
CHMP6Q96FZ7 REXO1L8P-201ENST00000604378 1897 ntBASIC16.68■□□□□ 0.26
CHMP6Q96FZ7 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.68■□□□□ 0.26
CHMP6Q96FZ7 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
CHMP6Q96FZ7 RCN1P1-201ENST00000400413 996 ntBASIC16.68■□□□□ 0.26
CHMP6Q96FZ7 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.68■□□□□ 0.26
CHMP6Q96FZ7 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP6Q96FZ7 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP6Q96FZ7 AC022616.7-201ENST00000525383 220 ntBASIC16.68■□□□□ 0.26
CHMP6Q96FZ7 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.68■□□□□ 0.26
CHMP6Q96FZ7 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP6Q96FZ7 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.68■□□□□ 0.26
CHMP6Q96FZ7 GPR32P1-201ENST00000601788 811 ntBASIC16.68■□□□□ 0.26
CHMP6Q96FZ7 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
CHMP6Q96FZ7 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.68■□□□□ 0.26
CHMP6Q96FZ7 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CHMP6Q96FZ7 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.68■□□□□ 0.26
CHMP6Q96FZ7 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms