Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SCAMP4Q969E2 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.37■□□□□ 0.21
SCAMP4Q969E2 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.37■□□□□ 0.21
SCAMP4Q969E2 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SCAMP4Q969E2 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
SCAMP4Q969E2 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SCAMP4Q969E2 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SCAMP4Q969E2 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.37■□□□□ 0.21
SCAMP4Q969E2 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SCAMP4Q969E2 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.37■□□□□ 0.21
SCAMP4Q969E2 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.37■□□□□ 0.21
SCAMP4Q969E2 RBPMS2P1-201ENST00000437762 623 ntBASIC16.37■□□□□ 0.21
SCAMP4Q969E2 HLA-J-203ENST00000494367 1087 ntBASIC16.37■□□□□ 0.21
SCAMP4Q969E2 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SCAMP4Q969E2 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.37■□□□□ 0.21
SCAMP4Q969E2 AC093028.1-201ENST00000622998 982 ntBASIC16.37■□□□□ 0.21
SCAMP4Q969E2 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.37■□□□□ 0.21
SCAMP4Q969E2 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.37■□□□□ 0.21
SCAMP4Q969E2 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.37■□□□□ 0.21
SCAMP4Q969E2 LINC00628-201ENST00000628516 1289 ntBASIC16.37■□□□□ 0.21
SCAMP4Q969E2 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.37■□□□□ 0.21
SCAMP4Q969E2 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SCAMP4Q969E2 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SCAMP4Q969E2 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.37■□□□□ 0.21
SCAMP4Q969E2 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SCAMP4Q969E2 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.37■□□□□ 0.21
SCAMP4Q969E2 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SCAMP4Q969E2 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SCAMP4Q969E2 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.37■□□□□ 0.21
SCAMP4Q969E2 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SCAMP4Q969E2 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SCAMP4Q969E2 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
SCAMP4Q969E2 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.36■□□□□ 0.21
SCAMP4Q969E2 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
SCAMP4Q969E2 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.36■□□□□ 0.21
SCAMP4Q969E2 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.36■□□□□ 0.21
SCAMP4Q969E2 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SCAMP4Q969E2 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SCAMP4Q969E2 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SCAMP4Q969E2 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
SCAMP4Q969E2 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SCAMP4Q969E2 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SCAMP4Q969E2 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SCAMP4Q969E2 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SCAMP4Q969E2 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
SCAMP4Q969E2 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.36■□□□□ 0.21
SCAMP4Q969E2 PMS2P2-201ENST00000425039 1128 ntBASIC16.36■□□□□ 0.21
SCAMP4Q969E2 AC093724.1-201ENST00000448659 1027 ntBASIC16.36■□□□□ 0.21
SCAMP4Q969E2 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.36■□□□□ 0.21
SCAMP4Q969E2 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.36■□□□□ 0.21
SCAMP4Q969E2 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.36■□□□□ 0.21
SCAMP4Q969E2 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
SCAMP4Q969E2 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.36■□□□□ 0.21
SCAMP4Q969E2 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
SCAMP4Q969E2 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
SCAMP4Q969E2 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.36■□□□□ 0.21
SCAMP4Q969E2 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
SCAMP4Q969E2 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
SCAMP4Q969E2 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.36■□□□□ 0.21
SCAMP4Q969E2 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SCAMP4Q969E2 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
SCAMP4Q969E2 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.36■□□□□ 0.21
SCAMP4Q969E2 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SCAMP4Q969E2 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SCAMP4Q969E2 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.35■□□□□ 0.21
SCAMP4Q969E2 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
SCAMP4Q969E2 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.35■□□□□ 0.21
SCAMP4Q969E2 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.35■□□□□ 0.21
SCAMP4Q969E2 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
SCAMP4Q969E2 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
SCAMP4Q969E2 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
SCAMP4Q969E2 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.35■□□□□ 0.21
SCAMP4Q969E2 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SCAMP4Q969E2 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SCAMP4Q969E2 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SCAMP4Q969E2 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SCAMP4Q969E2 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.35■□□□□ 0.21
SCAMP4Q969E2 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.35■□□□□ 0.21
SCAMP4Q969E2 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.35■□□□□ 0.21
SCAMP4Q969E2 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.35■□□□□ 0.21
SCAMP4Q969E2 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.35■□□□□ 0.21
SCAMP4Q969E2 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.35■□□□□ 0.21
SCAMP4Q969E2 AC004449.1-201ENST00000564240 433 ntBASIC16.35■□□□□ 0.21
SCAMP4Q969E2 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.35■□□□□ 0.21
SCAMP4Q969E2 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.35■□□□□ 0.21
SCAMP4Q969E2 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SCAMP4Q969E2 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.35■□□□□ 0.21
SCAMP4Q969E2 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.35■□□□□ 0.21
SCAMP4Q969E2 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SCAMP4Q969E2 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
SCAMP4Q969E2 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.35■□□□□ 0.21
SCAMP4Q969E2 LINC01144-201ENST00000626198 1710 ntBASIC16.35■□□□□ 0.21
SCAMP4Q969E2 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
SCAMP4Q969E2 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SCAMP4Q969E2 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
SCAMP4Q969E2 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.35■□□□□ 0.21
SCAMP4Q969E2 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
SCAMP4Q969E2 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SCAMP4Q969E2 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SCAMP4Q969E2 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms