Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 AC145285.6-201ENST00000604632 637 ntBASIC16.45■□□□□ 0.22
CKAP2Q8WWK9 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.45■□□□□ 0.22
CKAP2Q8WWK9 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CKAP2Q8WWK9 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CKAP2Q8WWK9 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CKAP2Q8WWK9 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CKAP2Q8WWK9 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.45■□□□□ 0.22
CKAP2Q8WWK9 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CKAP2Q8WWK9 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CKAP2Q8WWK9 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CKAP2Q8WWK9 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CKAP2Q8WWK9 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CKAP2Q8WWK9 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.45■□□□□ 0.22
CKAP2Q8WWK9 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CKAP2Q8WWK9 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CKAP2Q8WWK9 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
CKAP2Q8WWK9 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CKAP2Q8WWK9 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CKAP2Q8WWK9 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CKAP2Q8WWK9 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CKAP2Q8WWK9 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CKAP2Q8WWK9 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
CKAP2Q8WWK9 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.44■□□□□ 0.22
CKAP2Q8WWK9 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CKAP2Q8WWK9 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CKAP2Q8WWK9 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CKAP2Q8WWK9 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.44■□□□□ 0.22
CKAP2Q8WWK9 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CKAP2Q8WWK9 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CKAP2Q8WWK9 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CKAP2Q8WWK9 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.44■□□□□ 0.22
CKAP2Q8WWK9 SPDYE21P-201ENST00000413323 827 ntBASIC16.44■□□□□ 0.22
CKAP2Q8WWK9 TSPY22P-201ENST00000427496 604 ntBASIC16.44■□□□□ 0.22
CKAP2Q8WWK9 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CKAP2Q8WWK9 AC090616.6-201ENST00000582640 721 ntBASIC16.44■□□□□ 0.22
CKAP2Q8WWK9 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.44■□□□□ 0.22
CKAP2Q8WWK9 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CKAP2Q8WWK9 IGHV3-41-201ENST00000613121 348 ntBASIC16.44■□□□□ 0.22
CKAP2Q8WWK9 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CKAP2Q8WWK9 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
CKAP2Q8WWK9 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CKAP2Q8WWK9 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.44■□□□□ 0.22
CKAP2Q8WWK9 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
CKAP2Q8WWK9 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CKAP2Q8WWK9 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CKAP2Q8WWK9 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
CKAP2Q8WWK9 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.44■□□□□ 0.22
CKAP2Q8WWK9 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.44■□□□□ 0.22
CKAP2Q8WWK9 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.44■□□□□ 0.22
CKAP2Q8WWK9 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CKAP2Q8WWK9 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.44■□□□□ 0.22
CKAP2Q8WWK9 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CKAP2Q8WWK9 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CKAP2Q8WWK9 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CKAP2Q8WWK9 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CKAP2Q8WWK9 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CKAP2Q8WWK9 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.43■□□□□ 0.22
CKAP2Q8WWK9 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CKAP2Q8WWK9 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CKAP2Q8WWK9 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CKAP2Q8WWK9 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CKAP2Q8WWK9 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CKAP2Q8WWK9 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CKAP2Q8WWK9 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CKAP2Q8WWK9 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CKAP2Q8WWK9 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.43■□□□□ 0.22
CKAP2Q8WWK9 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
CKAP2Q8WWK9 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CKAP2Q8WWK9 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.43■□□□□ 0.22
CKAP2Q8WWK9 BX664615.1-201ENST00000443558 458 ntBASIC16.43■□□□□ 0.22
CKAP2Q8WWK9 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.43■□□□□ 0.22
CKAP2Q8WWK9 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.43■□□□□ 0.22
CKAP2Q8WWK9 AC091607.1-201ENST00000490318 1060 ntBASIC16.43■□□□□ 0.22
CKAP2Q8WWK9 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.43■□□□□ 0.22
CKAP2Q8WWK9 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.43■□□□□ 0.22
CKAP2Q8WWK9 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.43■□□□□ 0.22
CKAP2Q8WWK9 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.43■□□□□ 0.22
CKAP2Q8WWK9 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
CKAP2Q8WWK9 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.43■□□□□ 0.22
CKAP2Q8WWK9 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.43■□□□□ 0.22
CKAP2Q8WWK9 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CKAP2Q8WWK9 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CKAP2Q8WWK9 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CKAP2Q8WWK9 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CKAP2Q8WWK9 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CKAP2Q8WWK9 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CKAP2Q8WWK9 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.43■□□□□ 0.22
CKAP2Q8WWK9 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.43■□□□□ 0.22
CKAP2Q8WWK9 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.43■□□□□ 0.22
CKAP2Q8WWK9 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.43■□□□□ 0.22
CKAP2Q8WWK9 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CKAP2Q8WWK9 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CKAP2Q8WWK9 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CKAP2Q8WWK9 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CKAP2Q8WWK9 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CKAP2Q8WWK9 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.43■□□□□ 0.22
CKAP2Q8WWK9 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CKAP2Q8WWK9 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
CKAP2Q8WWK9 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CKAP2Q8WWK9 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms