Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
U2AF1L4Q8WU68 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.85■□□□□ 0.61
U2AF1L4Q8WU68 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
U2AF1L4Q8WU68 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
U2AF1L4Q8WU68 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
U2AF1L4Q8WU68 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
U2AF1L4Q8WU68 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
U2AF1L4Q8WU68 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
U2AF1L4Q8WU68 HCG4-201ENST00000418983 998 ntBASIC18.85■□□□□ 0.61
U2AF1L4Q8WU68 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
U2AF1L4Q8WU68 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18.85■□□□□ 0.61
U2AF1L4Q8WU68 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC18.85■□□□□ 0.61
U2AF1L4Q8WU68 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC18.85■□□□□ 0.61
U2AF1L4Q8WU68 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC18.85■□□□□ 0.61
U2AF1L4Q8WU68 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
U2AF1L4Q8WU68 MIR3909-201ENST00000579518 119 ntBASIC18.85■□□□□ 0.61
U2AF1L4Q8WU68 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC18.85■□□□□ 0.61
U2AF1L4Q8WU68 TEX28P1-201ENST00000613479 1221 ntBASIC18.85■□□□□ 0.61
U2AF1L4Q8WU68 TEX28P2-201ENST00000617764 1221 ntBASIC18.85■□□□□ 0.61
U2AF1L4Q8WU68 AC004840.1-201ENST00000636359 365 ntBASIC18.85■□□□□ 0.61
U2AF1L4Q8WU68 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
U2AF1L4Q8WU68 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
U2AF1L4Q8WU68 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
U2AF1L4Q8WU68 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
U2AF1L4Q8WU68 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
U2AF1L4Q8WU68 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
U2AF1L4Q8WU68 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
U2AF1L4Q8WU68 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
U2AF1L4Q8WU68 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
U2AF1L4Q8WU68 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
U2AF1L4Q8WU68 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
U2AF1L4Q8WU68 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
U2AF1L4Q8WU68 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
U2AF1L4Q8WU68 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
U2AF1L4Q8WU68 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.84■□□□□ 0.61
U2AF1L4Q8WU68 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
U2AF1L4Q8WU68 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
U2AF1L4Q8WU68 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
U2AF1L4Q8WU68 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
U2AF1L4Q8WU68 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
U2AF1L4Q8WU68 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
U2AF1L4Q8WU68 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.84■□□□□ 0.61
U2AF1L4Q8WU68 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC18.84■□□□□ 0.61
U2AF1L4Q8WU68 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC18.84■□□□□ 0.61
U2AF1L4Q8WU68 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
U2AF1L4Q8WU68 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC18.84■□□□□ 0.61
U2AF1L4Q8WU68 GNAQP1-201ENST00000444815 1067 ntBASIC18.84■□□□□ 0.61
U2AF1L4Q8WU68 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
U2AF1L4Q8WU68 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
U2AF1L4Q8WU68 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
U2AF1L4Q8WU68 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.84■□□□□ 0.61
U2AF1L4Q8WU68 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC18.84■□□□□ 0.61
U2AF1L4Q8WU68 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
U2AF1L4Q8WU68 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
U2AF1L4Q8WU68 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
U2AF1L4Q8WU68 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.84■□□□□ 0.61
U2AF1L4Q8WU68 OR6D1P-203ENST00000641209 4860 ntBASIC18.84■□□□□ 0.61
U2AF1L4Q8WU68 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
U2AF1L4Q8WU68 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
U2AF1L4Q8WU68 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
U2AF1L4Q8WU68 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.84■□□□□ 0.61
U2AF1L4Q8WU68 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
U2AF1L4Q8WU68 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
U2AF1L4Q8WU68 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
U2AF1L4Q8WU68 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.84■□□□□ 0.61
U2AF1L4Q8WU68 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.84■□□□□ 0.61
U2AF1L4Q8WU68 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
U2AF1L4Q8WU68 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.83■□□□□ 0.61
U2AF1L4Q8WU68 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.83■□□□□ 0.61
U2AF1L4Q8WU68 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
U2AF1L4Q8WU68 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
U2AF1L4Q8WU68 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
U2AF1L4Q8WU68 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
U2AF1L4Q8WU68 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
U2AF1L4Q8WU68 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
U2AF1L4Q8WU68 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.83■□□□□ 0.61
U2AF1L4Q8WU68 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
U2AF1L4Q8WU68 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
U2AF1L4Q8WU68 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
U2AF1L4Q8WU68 AC087499.6-201ENST00000411576 835 ntBASIC18.83■□□□□ 0.6
U2AF1L4Q8WU68 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC18.83■□□□□ 0.6
U2AF1L4Q8WU68 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
U2AF1L4Q8WU68 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC18.83■□□□□ 0.6
U2AF1L4Q8WU68 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC18.83■□□□□ 0.6
U2AF1L4Q8WU68 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC18.83■□□□□ 0.6
U2AF1L4Q8WU68 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
U2AF1L4Q8WU68 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
U2AF1L4Q8WU68 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
U2AF1L4Q8WU68 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
U2AF1L4Q8WU68 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
U2AF1L4Q8WU68 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
U2AF1L4Q8WU68 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
U2AF1L4Q8WU68 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
U2AF1L4Q8WU68 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC18.83■□□□□ 0.6
U2AF1L4Q8WU68 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
U2AF1L4Q8WU68 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.6
U2AF1L4Q8WU68 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
U2AF1L4Q8WU68 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
U2AF1L4Q8WU68 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
U2AF1L4Q8WU68 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms