Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RFWD2Q8NHY2 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFWD2Q8NHY2 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFWD2Q8NHY2 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFWD2Q8NHY2 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RFWD2Q8NHY2 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RFWD2Q8NHY2 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
RFWD2Q8NHY2 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
RFWD2Q8NHY2 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RFWD2Q8NHY2 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFWD2Q8NHY2 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFWD2Q8NHY2 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFWD2Q8NHY2 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RFWD2Q8NHY2 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RFWD2Q8NHY2 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RFWD2Q8NHY2 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
RFWD2Q8NHY2 AC004817.3-201ENST00000602957 2129 ntBASIC16.39■□□□□ 0.21
RFWD2Q8NHY2 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RFWD2Q8NHY2 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.38■□□□□ 0.21
RFWD2Q8NHY2 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.38■□□□□ 0.21
RFWD2Q8NHY2 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.38■□□□□ 0.21
RFWD2Q8NHY2 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
RFWD2Q8NHY2 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RFWD2Q8NHY2 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
RFWD2Q8NHY2 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RFWD2Q8NHY2 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.38■□□□□ 0.21
RFWD2Q8NHY2 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RFWD2Q8NHY2 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.38■□□□□ 0.21
RFWD2Q8NHY2 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RFWD2Q8NHY2 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RFWD2Q8NHY2 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RFWD2Q8NHY2 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RFWD2Q8NHY2 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RFWD2Q8NHY2 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.38■□□□□ 0.21
RFWD2Q8NHY2 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RFWD2Q8NHY2 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RFWD2Q8NHY2 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
RFWD2Q8NHY2 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.38■□□□□ 0.21
RFWD2Q8NHY2 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
RFWD2Q8NHY2 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.38■□□□□ 0.21
RFWD2Q8NHY2 AL136038.3-201ENST00000561909 1096 ntBASIC16.38■□□□□ 0.21
RFWD2Q8NHY2 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.38■□□□□ 0.21
RFWD2Q8NHY2 AC011840.4-201ENST00000578471 627 ntBASIC16.38■□□□□ 0.21
RFWD2Q8NHY2 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.38■□□□□ 0.21
RFWD2Q8NHY2 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RFWD2Q8NHY2 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
RFWD2Q8NHY2 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
RFWD2Q8NHY2 AL121956.5-201ENST00000625261 221 ntBASIC16.38■□□□□ 0.21
RFWD2Q8NHY2 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RFWD2Q8NHY2 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.38■□□□□ 0.21
RFWD2Q8NHY2 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.38■□□□□ 0.21
RFWD2Q8NHY2 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
RFWD2Q8NHY2 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.38■□□□□ 0.21
RFWD2Q8NHY2 AC005332.1-201ENST00000577698 1310 ntBASIC16.38■□□□□ 0.21
RFWD2Q8NHY2 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.38■□□□□ 0.21
RFWD2Q8NHY2 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RFWD2Q8NHY2 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
RFWD2Q8NHY2 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RFWD2Q8NHY2 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RFWD2Q8NHY2 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
RFWD2Q8NHY2 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
RFWD2Q8NHY2 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
RFWD2Q8NHY2 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RFWD2Q8NHY2 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFWD2Q8NHY2 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFWD2Q8NHY2 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RFWD2Q8NHY2 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RFWD2Q8NHY2 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
RFWD2Q8NHY2 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFWD2Q8NHY2 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RFWD2Q8NHY2 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFWD2Q8NHY2 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
RFWD2Q8NHY2 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFWD2Q8NHY2 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFWD2Q8NHY2 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.37■□□□□ 0.21
RFWD2Q8NHY2 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.37■□□□□ 0.21
RFWD2Q8NHY2 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.37■□□□□ 0.21
RFWD2Q8NHY2 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.37■□□□□ 0.21
RFWD2Q8NHY2 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RFWD2Q8NHY2 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RFWD2Q8NHY2 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RFWD2Q8NHY2 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RFWD2Q8NHY2 ARMC10P1-201ENST00000313754 855 ntBASIC16.37■□□□□ 0.21
RFWD2Q8NHY2 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.37■□□□□ 0.21
RFWD2Q8NHY2 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFWD2Q8NHY2 MIR1224-201ENST00000408193 85 ntBASIC16.37■□□□□ 0.21
RFWD2Q8NHY2 AC091607.1-201ENST00000490318 1060 ntBASIC16.37■□□□□ 0.21
RFWD2Q8NHY2 KRT18P35-201ENST00000510488 1269 ntBASIC16.37■□□□□ 0.21
RFWD2Q8NHY2 AC009533.2-201ENST00000543664 586 ntBASIC16.37■□□□□ 0.21
RFWD2Q8NHY2 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFWD2Q8NHY2 AC011498.5-201ENST00000592027 486 ntBASIC16.37■□□□□ 0.21
RFWD2Q8NHY2 AC011467.2-201ENST00000598425 242 ntBASIC16.37■□□□□ 0.21
RFWD2Q8NHY2 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
RFWD2Q8NHY2 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RFWD2Q8NHY2 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RFWD2Q8NHY2 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
RFWD2Q8NHY2 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFWD2Q8NHY2 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFWD2Q8NHY2 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFWD2Q8NHY2 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms