Protein–RNA interactions for Protein: Q8NDX2

SLC17A8, Vesicular glutamate transporter 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC17A8Q8NDX2 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC17A8Q8NDX2 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC18.54■□□□□ 0.56
SLC17A8Q8NDX2 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC17A8Q8NDX2 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC17A8Q8NDX2 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.54■□□□□ 0.56
SLC17A8Q8NDX2 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC17A8Q8NDX2 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SLC17A8Q8NDX2 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC17A8Q8NDX2 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC17A8Q8NDX2 AC098614.1-201ENST00000368528 745 ntBASIC18.54■□□□□ 0.56
SLC17A8Q8NDX2 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC17A8Q8NDX2 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC18.54■□□□□ 0.56
SLC17A8Q8NDX2 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
SLC17A8Q8NDX2 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC17A8Q8NDX2 STARD13-205ENST00000439831 945 ntTSL 2 BASIC18.54■□□□□ 0.56
SLC17A8Q8NDX2 AL513480.1-201ENST00000451731 511 ntBASIC18.54■□□□□ 0.56
SLC17A8Q8NDX2 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC18.54■□□□□ 0.56
SLC17A8Q8NDX2 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC17A8Q8NDX2 IGHV3OR16-16-201ENST00000563644 343 ntBASIC18.54■□□□□ 0.56
SLC17A8Q8NDX2 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC18.54■□□□□ 0.56
SLC17A8Q8NDX2 AD000864.1-201ENST00000624076 2295 ntBASIC18.54■□□□□ 0.56
SLC17A8Q8NDX2 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SLC17A8Q8NDX2 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC18.54■□□□□ 0.56
SLC17A8Q8NDX2 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SLC17A8Q8NDX2 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC17A8Q8NDX2 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC17A8Q8NDX2 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.54■□□□□ 0.56
SLC17A8Q8NDX2 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC17A8Q8NDX2 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC17A8Q8NDX2 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC17A8Q8NDX2 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC17A8Q8NDX2 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.53■□□□□ 0.56
SLC17A8Q8NDX2 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC17A8Q8NDX2 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC17A8Q8NDX2 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.53■□□□□ 0.56
SLC17A8Q8NDX2 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
SLC17A8Q8NDX2 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC17A8Q8NDX2 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC17A8Q8NDX2 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC17A8Q8NDX2 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC17A8Q8NDX2 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
SLC17A8Q8NDX2 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SLC17A8Q8NDX2 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SLC17A8Q8NDX2 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC17A8Q8NDX2 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC17A8Q8NDX2 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC17A8Q8NDX2 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC17A8Q8NDX2 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SLC17A8Q8NDX2 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC17A8Q8NDX2 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC17A8Q8NDX2 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
SLC17A8Q8NDX2 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SLC17A8Q8NDX2 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC18.53■□□□□ 0.56
SLC17A8Q8NDX2 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC18.53■□□□□ 0.56
SLC17A8Q8NDX2 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.53■□□□□ 0.56
SLC17A8Q8NDX2 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SLC17A8Q8NDX2 AC112191.1-201ENST00000523689 701 ntBASIC18.53■□□□□ 0.56
SLC17A8Q8NDX2 AC069120.2-201ENST00000524091 540 ntBASIC18.53■□□□□ 0.56
SLC17A8Q8NDX2 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC18.53■□□□□ 0.56
SLC17A8Q8NDX2 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
SLC17A8Q8NDX2 TP53TG3HP-202ENST00000569755 579 ntBASIC18.53■□□□□ 0.56
SLC17A8Q8NDX2 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
SLC17A8Q8NDX2 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC17A8Q8NDX2 CYP2A7P1-201ENST00000595391 815 ntBASIC18.53■□□□□ 0.56
SLC17A8Q8NDX2 WT1-AS_2.1-201ENST00000613208 137 ntBASIC18.53■□□□□ 0.56
SLC17A8Q8NDX2 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
SLC17A8Q8NDX2 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.53■□□□□ 0.56
SLC17A8Q8NDX2 IGHV3-72-202ENST00000621503 303 ntBASIC18.53■□□□□ 0.56
SLC17A8Q8NDX2 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SLC17A8Q8NDX2 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC17A8Q8NDX2 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SLC17A8Q8NDX2 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SLC17A8Q8NDX2 AL645728.1-201ENST00000366221 2101 ntBASIC18.53■□□□□ 0.56
SLC17A8Q8NDX2 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC17A8Q8NDX2 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC18.53■□□□□ 0.56
SLC17A8Q8NDX2 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
SLC17A8Q8NDX2 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.53■□□□□ 0.56
SLC17A8Q8NDX2 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SLC17A8Q8NDX2 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
SLC17A8Q8NDX2 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC17A8Q8NDX2 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
SLC17A8Q8NDX2 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC17A8Q8NDX2 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
SLC17A8Q8NDX2 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
SLC17A8Q8NDX2 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SLC17A8Q8NDX2 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
SLC17A8Q8NDX2 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SLC17A8Q8NDX2 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC17A8Q8NDX2 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC17A8Q8NDX2 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC17A8Q8NDX2 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
SLC17A8Q8NDX2 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC17A8Q8NDX2 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.52■□□□□ 0.56
SLC17A8Q8NDX2 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC17A8Q8NDX2 RPL28-204ENST00000431533 590 ntTSL 2 BASIC18.52■□□□□ 0.56
SLC17A8Q8NDX2 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC18.52■□□□□ 0.56
SLC17A8Q8NDX2 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC17A8Q8NDX2 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
SLC17A8Q8NDX2 AL592309.1-201ENST00000443127 649 ntBASIC18.52■□□□□ 0.56
SLC17A8Q8NDX2 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms