Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SCML4Q8N228 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCML4Q8N228 REXO1L8P-201ENST00000604378 1897 ntBASIC17.09■□□□□ 0.33
SCML4Q8N228 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SCML4Q8N228 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCML4Q8N228 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCML4Q8N228 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.09■□□□□ 0.33
SCML4Q8N228 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCML4Q8N228 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SCML4Q8N228 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SCML4Q8N228 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCML4Q8N228 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SCML4Q8N228 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.08■□□□□ 0.33
SCML4Q8N228 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SCML4Q8N228 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
SCML4Q8N228 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.08■□□□□ 0.33
SCML4Q8N228 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SCML4Q8N228 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SCML4Q8N228 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SCML4Q8N228 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.08■□□□□ 0.32
SCML4Q8N228 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SCML4Q8N228 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SCML4Q8N228 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SCML4Q8N228 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
SCML4Q8N228 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.08■□□□□ 0.32
SCML4Q8N228 CNN2P2-201ENST00000443536 909 ntBASIC17.08■□□□□ 0.32
SCML4Q8N228 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.08■□□□□ 0.32
SCML4Q8N228 CNN2P3-201ENST00000450201 906 ntBASIC17.08■□□□□ 0.32
SCML4Q8N228 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SCML4Q8N228 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.08■□□□□ 0.32
SCML4Q8N228 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.08■□□□□ 0.32
SCML4Q8N228 AC004449.1-201ENST00000564240 433 ntBASIC17.08■□□□□ 0.32
SCML4Q8N228 AC007967.4-201ENST00000614700 386 ntBASIC17.08■□□□□ 0.32
SCML4Q8N228 AL136317.3-201ENST00000618497 906 ntBASIC17.08■□□□□ 0.32
SCML4Q8N228 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SCML4Q8N228 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SCML4Q8N228 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
SCML4Q8N228 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.08■□□□□ 0.32
SCML4Q8N228 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SCML4Q8N228 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.32
SCML4Q8N228 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SCML4Q8N228 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCML4Q8N228 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.07■□□□□ 0.32
SCML4Q8N228 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.07■□□□□ 0.32
SCML4Q8N228 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SCML4Q8N228 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCML4Q8N228 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SCML4Q8N228 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.07■□□□□ 0.32
SCML4Q8N228 MTHFR-217ENST00000641820 1569 ntBASIC17.07■□□□□ 0.32
SCML4Q8N228 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCML4Q8N228 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SCML4Q8N228 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.07■□□□□ 0.32
SCML4Q8N228 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SCML4Q8N228 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SCML4Q8N228 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCML4Q8N228 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCML4Q8N228 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCML4Q8N228 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SCML4Q8N228 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SCML4Q8N228 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SCML4Q8N228 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.07■□□□□ 0.32
SCML4Q8N228 AL645939.2-201ENST00000427340 991 ntBASIC17.07■□□□□ 0.32
SCML4Q8N228 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.07■□□□□ 0.32
SCML4Q8N228 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.07■□□□□ 0.32
SCML4Q8N228 AC067863.1-201ENST00000494933 530 ntBASIC17.07■□□□□ 0.32
SCML4Q8N228 RNA5SP410-201ENST00000516285 106 ntBASIC17.07■□□□□ 0.32
SCML4Q8N228 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.07■□□□□ 0.32
SCML4Q8N228 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCML4Q8N228 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
SCML4Q8N228 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.07■□□□□ 0.32
SCML4Q8N228 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SCML4Q8N228 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SCML4Q8N228 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.07■□□□□ 0.32
SCML4Q8N228 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCML4Q8N228 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCML4Q8N228 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.07■□□□□ 0.32
SCML4Q8N228 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
SCML4Q8N228 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.07■□□□□ 0.32
SCML4Q8N228 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SCML4Q8N228 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.07■□□□□ 0.32
SCML4Q8N228 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.07■□□□□ 0.32
SCML4Q8N228 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
SCML4Q8N228 PCDHA14-201ENST00000506751 2298 ntBASIC17.07■□□□□ 0.32
SCML4Q8N228 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SCML4Q8N228 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.06■□□□□ 0.32
SCML4Q8N228 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCML4Q8N228 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.06■□□□□ 0.32
SCML4Q8N228 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCML4Q8N228 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCML4Q8N228 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.06■□□□□ 0.32
SCML4Q8N228 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SCML4Q8N228 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.06■□□□□ 0.32
SCML4Q8N228 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCML4Q8N228 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SCML4Q8N228 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.06■□□□□ 0.32
SCML4Q8N228 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCML4Q8N228 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.06■□□□□ 0.32
SCML4Q8N228 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCML4Q8N228 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SCML4Q8N228 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms