Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 SPDYE12P-201ENST00000618416 771 ntBASIC17.51■□□□□ 0.39
RNF135Q8IUD6 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
RNF135Q8IUD6 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
RNF135Q8IUD6 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF135Q8IUD6 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
RNF135Q8IUD6 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.51■□□□□ 0.39
RNF135Q8IUD6 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF135Q8IUD6 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
RNF135Q8IUD6 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF135Q8IUD6 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.51■□□□□ 0.39
RNF135Q8IUD6 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF135Q8IUD6 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF135Q8IUD6 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
RNF135Q8IUD6 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF135Q8IUD6 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF135Q8IUD6 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.5■□□□□ 0.39
RNF135Q8IUD6 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
RNF135Q8IUD6 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF135Q8IUD6 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF135Q8IUD6 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF135Q8IUD6 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RNF135Q8IUD6 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RNF135Q8IUD6 AC099398.1-201ENST00000567919 2776 ntBASIC17.5■□□□□ 0.39
RNF135Q8IUD6 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
RNF135Q8IUD6 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
RNF135Q8IUD6 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RNF135Q8IUD6 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC17.5■□□□□ 0.39
RNF135Q8IUD6 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
RNF135Q8IUD6 AL353779.1-201ENST00000434793 351 ntBASIC17.5■□□□□ 0.39
RNF135Q8IUD6 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.5■□□□□ 0.39
RNF135Q8IUD6 INE1-201ENST00000456273 945 ntBASIC17.5■□□□□ 0.39
RNF135Q8IUD6 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.5■□□□□ 0.39
RNF135Q8IUD6 API5-211ENST00000534695 560 ntTSL 5 BASIC17.5■□□□□ 0.39
RNF135Q8IUD6 MPI-209ENST00000564003 1195 ntTSL 2 BASIC17.5■□□□□ 0.39
RNF135Q8IUD6 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC17.5■□□□□ 0.39
RNF135Q8IUD6 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.5■□□□□ 0.39
RNF135Q8IUD6 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.5■□□□□ 0.39
RNF135Q8IUD6 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
RNF135Q8IUD6 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RNF135Q8IUD6 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RNF135Q8IUD6 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF135Q8IUD6 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.5■□□□□ 0.39
RNF135Q8IUD6 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RNF135Q8IUD6 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF135Q8IUD6 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RNF135Q8IUD6 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF135Q8IUD6 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.49■□□□□ 0.39
RNF135Q8IUD6 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RNF135Q8IUD6 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF135Q8IUD6 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF135Q8IUD6 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.49■□□□□ 0.39
RNF135Q8IUD6 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF135Q8IUD6 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF135Q8IUD6 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
RNF135Q8IUD6 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF135Q8IUD6 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF135Q8IUD6 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
RNF135Q8IUD6 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RNF135Q8IUD6 MIR658-201ENST00000385210 100 ntBASIC17.49■□□□□ 0.39
RNF135Q8IUD6 AC079776.1-201ENST00000401540 1152 ntBASIC17.49■□□□□ 0.39
RNF135Q8IUD6 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
RNF135Q8IUD6 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RNF135Q8IUD6 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.49■□□□□ 0.39
RNF135Q8IUD6 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RNF135Q8IUD6 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RNF135Q8IUD6 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
RNF135Q8IUD6 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC17.49■□□□□ 0.39
RNF135Q8IUD6 AC109635.5-201ENST00000533593 962 ntBASIC17.49■□□□□ 0.39
RNF135Q8IUD6 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC17.49■□□□□ 0.39
RNF135Q8IUD6 AL138828.2-201ENST00000615812 383 ntBASIC17.49■□□□□ 0.39
RNF135Q8IUD6 SNX12-206ENST00000622259 661 ntTSL 5 BASIC17.49■□□□□ 0.39
RNF135Q8IUD6 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
RNF135Q8IUD6 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
RNF135Q8IUD6 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF135Q8IUD6 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
RNF135Q8IUD6 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.49■□□□□ 0.39
RNF135Q8IUD6 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RNF135Q8IUD6 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RNF135Q8IUD6 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.49■□□□□ 0.39
RNF135Q8IUD6 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
RNF135Q8IUD6 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF135Q8IUD6 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RNF135Q8IUD6 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.49■□□□□ 0.39
RNF135Q8IUD6 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
RNF135Q8IUD6 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RNF135Q8IUD6 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
RNF135Q8IUD6 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF135Q8IUD6 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF135Q8IUD6 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
RNF135Q8IUD6 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF135Q8IUD6 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF135Q8IUD6 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.48■□□□□ 0.39
RNF135Q8IUD6 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF135Q8IUD6 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RNF135Q8IUD6 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF135Q8IUD6 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
RNF135Q8IUD6 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF135Q8IUD6 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF135Q8IUD6 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF135Q8IUD6 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms