Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
LRRC28Q86X40 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.77□□□□□ -0.04
LRRC28Q86X40 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LRRC28Q86X40 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LRRC28Q86X40 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LRRC28Q86X40 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LRRC28Q86X40 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
LRRC28Q86X40 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.05
LRRC28Q86X40 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC14.77□□□□□ -0.05
LRRC28Q86X40 FAM197Y8-203ENST00000450145 560 ntBASIC14.77□□□□□ -0.05
LRRC28Q86X40 FGFR3P6-201ENST00000457012 610 ntBASIC14.77□□□□□ -0.05
LRRC28Q86X40 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LRRC28Q86X40 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
LRRC28Q86X40 AL662844.1-201ENST00000546340 181 ntBASIC14.77□□□□□ -0.05
LRRC28Q86X40 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.77□□□□□ -0.05
LRRC28Q86X40 AC109462.3-201ENST00000573934 613 ntBASIC14.77□□□□□ -0.05
LRRC28Q86X40 AC019129.2-201ENST00000609837 1235 ntBASIC14.77□□□□□ -0.05
LRRC28Q86X40 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC14.77□□□□□ -0.05
LRRC28Q86X40 AD001527.2-201ENST00000622994 785 ntBASIC14.77□□□□□ -0.05
LRRC28Q86X40 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LRRC28Q86X40 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
LRRC28Q86X40 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.77□□□□□ -0.05
LRRC28Q86X40 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LRRC28Q86X40 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
LRRC28Q86X40 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
LRRC28Q86X40 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LRRC28Q86X40 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
LRRC28Q86X40 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
LRRC28Q86X40 AC006058.4-201ENST00000624016 1670 ntBASIC14.77□□□□□ -0.05
LRRC28Q86X40 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.77□□□□□ -0.05
LRRC28Q86X40 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
LRRC28Q86X40 NORAD-201ENST00000565493 5339 ntBASIC14.77□□□□□ -0.05
LRRC28Q86X40 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.77□□□□□ -0.05
LRRC28Q86X40 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
LRRC28Q86X40 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC14.76□□□□□ -0.05
LRRC28Q86X40 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LRRC28Q86X40 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRRC28Q86X40 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LRRC28Q86X40 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRRC28Q86X40 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.76□□□□□ -0.05
LRRC28Q86X40 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.76□□□□□ -0.05
LRRC28Q86X40 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.76□□□□□ -0.05
LRRC28Q86X40 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRRC28Q86X40 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRRC28Q86X40 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRRC28Q86X40 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.76□□□□□ -0.05
LRRC28Q86X40 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LRRC28Q86X40 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
LRRC28Q86X40 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
LRRC28Q86X40 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.76□□□□□ -0.05
LRRC28Q86X40 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRRC28Q86X40 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LRRC28Q86X40 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRRC28Q86X40 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.76□□□□□ -0.05
LRRC28Q86X40 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRRC28Q86X40 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
LRRC28Q86X40 HIST2H3DP1-201ENST00000401004 416 ntBASIC14.76□□□□□ -0.05
LRRC28Q86X40 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC14.76□□□□□ -0.05
LRRC28Q86X40 AC009078.2-202ENST00000463353 338 ntBASIC14.76□□□□□ -0.05
LRRC28Q86X40 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.76□□□□□ -0.05
LRRC28Q86X40 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC14.76□□□□□ -0.05
LRRC28Q86X40 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LRRC28Q86X40 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC14.76□□□□□ -0.05
LRRC28Q86X40 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
LRRC28Q86X40 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
LRRC28Q86X40 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRRC28Q86X40 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.76□□□□□ -0.05
LRRC28Q86X40 AC068587.6-202ENST00000641839 5619 ntBASIC14.76□□□□□ -0.05
LRRC28Q86X40 PMPCAP1-201ENST00000508114 1576 ntBASIC14.76□□□□□ -0.05
LRRC28Q86X40 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LRRC28Q86X40 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRRC28Q86X40 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRRC28Q86X40 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LRRC28Q86X40 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
LRRC28Q86X40 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRRC28Q86X40 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRRC28Q86X40 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.76□□□□□ -0.05
LRRC28Q86X40 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.76□□□□□ -0.05
LRRC28Q86X40 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRRC28Q86X40 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRRC28Q86X40 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.76□□□□□ -0.05
LRRC28Q86X40 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRRC28Q86X40 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.75□□□□□ -0.05
LRRC28Q86X40 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRRC28Q86X40 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
LRRC28Q86X40 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.75□□□□□ -0.05
LRRC28Q86X40 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LRRC28Q86X40 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRRC28Q86X40 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRRC28Q86X40 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRRC28Q86X40 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LRRC28Q86X40 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
LRRC28Q86X40 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LRRC28Q86X40 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRRC28Q86X40 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRRC28Q86X40 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.75□□□□□ -0.05
LRRC28Q86X40 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC14.75□□□□□ -0.05
LRRC28Q86X40 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC14.75□□□□□ -0.05
LRRC28Q86X40 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LRRC28Q86X40 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms