Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 SNX33P1-201ENST00000592116 1762 ntBASIC14.65□□□□□ -0.06
RTTNQ86VV8 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RTTNQ86VV8 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RTTNQ86VV8 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
RTTNQ86VV8 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RTTNQ86VV8 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RTTNQ86VV8 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RTTNQ86VV8 HMGA1P7-201ENST00000406908 502 ntBASIC14.65□□□□□ -0.06
RTTNQ86VV8 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RTTNQ86VV8 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
RTTNQ86VV8 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.65□□□□□ -0.06
RTTNQ86VV8 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.65□□□□□ -0.06
RTTNQ86VV8 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.65□□□□□ -0.06
RTTNQ86VV8 SNHG9-202ENST00000564014 471 ntBASIC14.65□□□□□ -0.06
RTTNQ86VV8 AC004790.2-201ENST00000623588 572 ntBASIC14.65□□□□□ -0.06
RTTNQ86VV8 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.65□□□□□ -0.06
RTTNQ86VV8 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.65□□□□□ -0.06
RTTNQ86VV8 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.65□□□□□ -0.06
RTTNQ86VV8 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC14.65□□□□□ -0.06
RTTNQ86VV8 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
RTTNQ86VV8 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.65□□□□□ -0.06
RTTNQ86VV8 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RTTNQ86VV8 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
RTTNQ86VV8 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RTTNQ86VV8 AC138969.2-201ENST00000532739 9932 ntBASIC14.64□□□□□ -0.07
RTTNQ86VV8 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC14.64□□□□□ -0.07
RTTNQ86VV8 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RTTNQ86VV8 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
RTTNQ86VV8 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.64□□□□□ -0.07
RTTNQ86VV8 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.64□□□□□ -0.07
RTTNQ86VV8 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RTTNQ86VV8 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RTTNQ86VV8 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RTTNQ86VV8 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
RTTNQ86VV8 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
RTTNQ86VV8 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.64□□□□□ -0.07
RTTNQ86VV8 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RTTNQ86VV8 MRPL20P1-201ENST00000400819 433 ntBASIC14.64□□□□□ -0.07
RTTNQ86VV8 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.64□□□□□ -0.07
RTTNQ86VV8 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.64□□□□□ -0.07
RTTNQ86VV8 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.64□□□□□ -0.07
RTTNQ86VV8 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.64□□□□□ -0.07
RTTNQ86VV8 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.64□□□□□ -0.07
RTTNQ86VV8 MEIS3P1-201ENST00000495167 958 ntBASIC14.64□□□□□ -0.07
RTTNQ86VV8 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
RTTNQ86VV8 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.64□□□□□ -0.07
RTTNQ86VV8 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.64□□□□□ -0.07
RTTNQ86VV8 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RTTNQ86VV8 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RTTNQ86VV8 AL118508.1-201ENST00000613502 2345 ntBASIC14.64□□□□□ -0.07
RTTNQ86VV8 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RTTNQ86VV8 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.64□□□□□ -0.07
RTTNQ86VV8 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RTTNQ86VV8 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.64□□□□□ -0.07
RTTNQ86VV8 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC14.64□□□□□ -0.07
RTTNQ86VV8 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RTTNQ86VV8 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RTTNQ86VV8 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RTTNQ86VV8 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RTTNQ86VV8 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RTTNQ86VV8 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RTTNQ86VV8 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
RTTNQ86VV8 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.64□□□□□ -0.07
RTTNQ86VV8 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RTTNQ86VV8 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC14.64□□□□□ -0.07
RTTNQ86VV8 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.64□□□□□ -0.07
RTTNQ86VV8 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
RTTNQ86VV8 AC063926.2-201ENST00000623766 1308 ntBASIC14.63□□□□□ -0.07
RTTNQ86VV8 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RTTNQ86VV8 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.63□□□□□ -0.07
RTTNQ86VV8 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RTTNQ86VV8 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC14.63□□□□□ -0.07
RTTNQ86VV8 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RTTNQ86VV8 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RTTNQ86VV8 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RTTNQ86VV8 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
RTTNQ86VV8 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RTTNQ86VV8 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RTTNQ86VV8 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
RTTNQ86VV8 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.63□□□□□ -0.07
RTTNQ86VV8 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RTTNQ86VV8 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.63□□□□□ -0.07
RTTNQ86VV8 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
RTTNQ86VV8 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RTTNQ86VV8 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
RTTNQ86VV8 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RTTNQ86VV8 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RTTNQ86VV8 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.63□□□□□ -0.07
RTTNQ86VV8 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
RTTNQ86VV8 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.63□□□□□ -0.07
RTTNQ86VV8 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
RTTNQ86VV8 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.63□□□□□ -0.07
RTTNQ86VV8 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
RTTNQ86VV8 ACTL9-202ENST00000612068 1252 ntBASIC14.63□□□□□ -0.07
RTTNQ86VV8 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RTTNQ86VV8 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RTTNQ86VV8 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RTTNQ86VV8 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RTTNQ86VV8 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
RTTNQ86VV8 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms