Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF43Q68DV7 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF43Q68DV7 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
RNF43Q68DV7 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.35■□□□□ 0.37
RNF43Q68DV7 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF43Q68DV7 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
RNF43Q68DV7 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF43Q68DV7 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
RNF43Q68DV7 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF43Q68DV7 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF43Q68DV7 AC105917.1-201ENST00000506637 2539 ntBASIC17.35■□□□□ 0.37
RNF43Q68DV7 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF43Q68DV7 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF43Q68DV7 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF43Q68DV7 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF43Q68DV7 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
RNF43Q68DV7 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.34■□□□□ 0.37
RNF43Q68DV7 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF43Q68DV7 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF43Q68DV7 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF43Q68DV7 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF43Q68DV7 AL139400.1-201ENST00000366220 510 ntBASIC17.34■□□□□ 0.37
RNF43Q68DV7 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.34■□□□□ 0.37
RNF43Q68DV7 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC17.34■□□□□ 0.37
RNF43Q68DV7 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF43Q68DV7 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF43Q68DV7 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.34■□□□□ 0.37
RNF43Q68DV7 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.34■□□□□ 0.37
RNF43Q68DV7 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF43Q68DV7 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF43Q68DV7 HCG4-201ENST00000418983 998 ntBASIC17.34■□□□□ 0.37
RNF43Q68DV7 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF43Q68DV7 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF43Q68DV7 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
RNF43Q68DV7 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
RNF43Q68DV7 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
RNF43Q68DV7 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC17.34■□□□□ 0.37
RNF43Q68DV7 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
RNF43Q68DV7 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF43Q68DV7 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.34■□□□□ 0.37
RNF43Q68DV7 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.34■□□□□ 0.37
RNF43Q68DV7 AC099522.2-201ENST00000607001 744 ntBASIC17.34■□□□□ 0.37
RNF43Q68DV7 AC092171.3-201ENST00000610122 2651 ntBASIC17.34■□□□□ 0.37
RNF43Q68DV7 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.34■□□□□ 0.37
RNF43Q68DV7 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.34■□□□□ 0.37
RNF43Q68DV7 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
RNF43Q68DV7 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
RNF43Q68DV7 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF43Q68DV7 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
RNF43Q68DV7 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RNF43Q68DV7 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF43Q68DV7 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF43Q68DV7 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF43Q68DV7 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
RNF43Q68DV7 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF43Q68DV7 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
RNF43Q68DV7 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF43Q68DV7 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RNF43Q68DV7 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.33■□□□□ 0.37
RNF43Q68DV7 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.33■□□□□ 0.37
RNF43Q68DV7 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.33■□□□□ 0.37
RNF43Q68DV7 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.33■□□□□ 0.37
RNF43Q68DV7 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
RNF43Q68DV7 KRT8P49-201ENST00000604166 1432 ntBASIC17.33■□□□□ 0.36
RNF43Q68DV7 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
RNF43Q68DV7 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF43Q68DV7 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RNF43Q68DV7 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
RNF43Q68DV7 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF43Q68DV7 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RNF43Q68DV7 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.33■□□□□ 0.36
RNF43Q68DV7 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RNF43Q68DV7 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.33■□□□□ 0.36
RNF43Q68DV7 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.33■□□□□ 0.36
RNF43Q68DV7 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RNF43Q68DV7 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RNF43Q68DV7 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
RNF43Q68DV7 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.33■□□□□ 0.36
RNF43Q68DV7 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.33■□□□□ 0.36
RNF43Q68DV7 MIR4492-201ENST00000581627 80 ntBASIC17.33■□□□□ 0.36
RNF43Q68DV7 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.33■□□□□ 0.36
RNF43Q68DV7 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.33■□□□□ 0.36
RNF43Q68DV7 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
RNF43Q68DV7 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF43Q68DV7 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
RNF43Q68DV7 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF43Q68DV7 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.33■□□□□ 0.36
RNF43Q68DV7 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF43Q68DV7 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF43Q68DV7 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
RNF43Q68DV7 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.33■□□□□ 0.36
RNF43Q68DV7 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF43Q68DV7 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RNF43Q68DV7 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
RNF43Q68DV7 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF43Q68DV7 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF43Q68DV7 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF43Q68DV7 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF43Q68DV7 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF43Q68DV7 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms