Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CDC42BPAQ5VT25 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CDC42BPAQ5VT25 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CDC42BPAQ5VT25 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
CDC42BPAQ5VT25 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CDC42BPAQ5VT25 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CDC42BPAQ5VT25 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CDC42BPAQ5VT25 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
CDC42BPAQ5VT25 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC24.49■■□□□ 1.51
CDC42BPAQ5VT25 CTBP2P5-201ENST00000454986 1264 ntBASIC24.49■■□□□ 1.51
CDC42BPAQ5VT25 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC24.49■■□□□ 1.51
CDC42BPAQ5VT25 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC24.49■■□□□ 1.51
CDC42BPAQ5VT25 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC24.49■■□□□ 1.51
CDC42BPAQ5VT25 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC24.49■■□□□ 1.51
CDC42BPAQ5VT25 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC24.49■■□□□ 1.51
CDC42BPAQ5VT25 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
CDC42BPAQ5VT25 AC105020.1-201ENST00000435356 2205 ntBASIC24.49■■□□□ 1.51
CDC42BPAQ5VT25 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
CDC42BPAQ5VT25 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC24.49■■□□□ 1.51
CDC42BPAQ5VT25 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
CDC42BPAQ5VT25 AL691432.1-201ENST00000596308 1422 ntBASIC24.49■■□□□ 1.51
CDC42BPAQ5VT25 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CDC42BPAQ5VT25 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CDC42BPAQ5VT25 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC24.49■■□□□ 1.51
CDC42BPAQ5VT25 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CDC42BPAQ5VT25 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC24.49■■□□□ 1.51
CDC42BPAQ5VT25 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC24.49■■□□□ 1.51
CDC42BPAQ5VT25 FXR1-221ENST00000491674 365 ntTSL 2 BASIC24.49■■□□□ 1.51
CDC42BPAQ5VT25 NOP2-211ENST00000540228 668 ntTSL 2 BASIC24.49■■□□□ 1.51
CDC42BPAQ5VT25 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CDC42BPAQ5VT25 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC24.49■■□□□ 1.51
CDC42BPAQ5VT25 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
CDC42BPAQ5VT25 CU634019.7-201ENST00000624153 1185 ntBASIC24.49■■□□□ 1.51
CDC42BPAQ5VT25 FP236241.2-201ENST00000624906 1185 ntBASIC24.49■■□□□ 1.51
CDC42BPAQ5VT25 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC24.49■■□□□ 1.51
CDC42BPAQ5VT25 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
CDC42BPAQ5VT25 LINC01144-201ENST00000626198 1710 ntBASIC24.49■■□□□ 1.51
CDC42BPAQ5VT25 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CDC42BPAQ5VT25 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CDC42BPAQ5VT25 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CDC42BPAQ5VT25 AC005229.1-201ENST00000392885 409 ntBASIC24.48■■□□□ 1.51
CDC42BPAQ5VT25 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC24.48■■□□□ 1.51
CDC42BPAQ5VT25 AC104596.2-201ENST00000512793 793 ntBASIC24.48■■□□□ 1.51
CDC42BPAQ5VT25 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC24.48■■□□□ 1.51
CDC42BPAQ5VT25 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CDC42BPAQ5VT25 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC24.48■■□□□ 1.51
CDC42BPAQ5VT25 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC24.48■■□□□ 1.51
CDC42BPAQ5VT25 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC24.48■■□□□ 1.51
CDC42BPAQ5VT25 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CDC42BPAQ5VT25 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CDC42BPAQ5VT25 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CDC42BPAQ5VT25 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
CDC42BPAQ5VT25 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
CDC42BPAQ5VT25 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC24.47■■□□□ 1.51
CDC42BPAQ5VT25 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
CDC42BPAQ5VT25 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CDC42BPAQ5VT25 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
CDC42BPAQ5VT25 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC24.47■■□□□ 1.51
CDC42BPAQ5VT25 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
CDC42BPAQ5VT25 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
CDC42BPAQ5VT25 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
CDC42BPAQ5VT25 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC24.47■■□□□ 1.51
CDC42BPAQ5VT25 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC24.47■■□□□ 1.51
CDC42BPAQ5VT25 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CDC42BPAQ5VT25 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC24.47■■□□□ 1.51
CDC42BPAQ5VT25 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
CDC42BPAQ5VT25 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CDC42BPAQ5VT25 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
CDC42BPAQ5VT25 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
CDC42BPAQ5VT25 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC24.47■■□□□ 1.51
CDC42BPAQ5VT25 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
CDC42BPAQ5VT25 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
CDC42BPAQ5VT25 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC24.47■■□□□ 1.51
CDC42BPAQ5VT25 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC24.47■■□□□ 1.51
CDC42BPAQ5VT25 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC24.47■■□□□ 1.51
CDC42BPAQ5VT25 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
CDC42BPAQ5VT25 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
CDC42BPAQ5VT25 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
CDC42BPAQ5VT25 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC24.47■■□□□ 1.51
CDC42BPAQ5VT25 FTH1P14-201ENST00000482930 551 ntBASIC24.47■■□□□ 1.51
CDC42BPAQ5VT25 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC24.47■■□□□ 1.51
CDC42BPAQ5VT25 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC24.47■■□□□ 1.51
CDC42BPAQ5VT25 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CDC42BPAQ5VT25 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CDC42BPAQ5VT25 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CDC42BPAQ5VT25 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
CDC42BPAQ5VT25 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC24.46■■□□□ 1.51
CDC42BPAQ5VT25 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
CDC42BPAQ5VT25 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC24.46■■□□□ 1.51
CDC42BPAQ5VT25 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CDC42BPAQ5VT25 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC24.46■■□□□ 1.51
CDC42BPAQ5VT25 AC004987.2-201ENST00000395959 1148 ntBASIC24.46■■□□□ 1.51
CDC42BPAQ5VT25 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC24.46■■□□□ 1.51
CDC42BPAQ5VT25 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
CDC42BPAQ5VT25 MIR4538-201ENST00000581377 78 ntBASIC24.46■■□□□ 1.51
CDC42BPAQ5VT25 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
CDC42BPAQ5VT25 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC24.46■■□□□ 1.51
CDC42BPAQ5VT25 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
CDC42BPAQ5VT25 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC24.46■■□□□ 1.51
CDC42BPAQ5VT25 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms