Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
ALFQ53S48 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.97■□□□□ 0.31
ALFQ53S48 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.97■□□□□ 0.31
ALFQ53S48 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.97■□□□□ 0.31
ALFQ53S48 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
ALFQ53S48 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ALFQ53S48 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.96■□□□□ 0.31
ALFQ53S48 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
ALFQ53S48 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.96■□□□□ 0.31
ALFQ53S48 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.96■□□□□ 0.31
ALFQ53S48 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ALFQ53S48 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ALFQ53S48 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ALFQ53S48 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.96■□□□□ 0.31
ALFQ53S48 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
ALFQ53S48 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.96■□□□□ 0.31
ALFQ53S48 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.96■□□□□ 0.31
ALFQ53S48 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.96■□□□□ 0.31
ALFQ53S48 AC005237.2-201ENST00000434368 219 ntBASIC16.96■□□□□ 0.31
ALFQ53S48 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.96■□□□□ 0.31
ALFQ53S48 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.96■□□□□ 0.31
ALFQ53S48 PRYP6-201ENST00000514804 343 ntBASIC16.96■□□□□ 0.31
ALFQ53S48 IGHV3-62-201ENST00000520057 340 ntBASIC16.96■□□□□ 0.31
ALFQ53S48 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
ALFQ53S48 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
ALFQ53S48 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
ALFQ53S48 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.96■□□□□ 0.31
ALFQ53S48 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.96■□□□□ 0.31
ALFQ53S48 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.96■□□□□ 0.31
ALFQ53S48 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ALFQ53S48 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.96■□□□□ 0.31
ALFQ53S48 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ALFQ53S48 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.96■□□□□ 0.31
ALFQ53S48 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
ALFQ53S48 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ALFQ53S48 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ALFQ53S48 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
ALFQ53S48 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ALFQ53S48 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ALFQ53S48 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.96■□□□□ 0.31
ALFQ53S48 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ALFQ53S48 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ALFQ53S48 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
ALFQ53S48 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.96■□□□□ 0.3
ALFQ53S48 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.96■□□□□ 0.3
ALFQ53S48 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
ALFQ53S48 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
ALFQ53S48 FOXO1B-201ENST00000504678 1527 ntBASIC16.96■□□□□ 0.3
ALFQ53S48 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.96■□□□□ 0.3
ALFQ53S48 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.96■□□□□ 0.3
ALFQ53S48 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ALFQ53S48 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
ALFQ53S48 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
ALFQ53S48 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ALFQ53S48 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.95■□□□□ 0.3
ALFQ53S48 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ALFQ53S48 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.95■□□□□ 0.3
ALFQ53S48 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ALFQ53S48 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
ALFQ53S48 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.95■□□□□ 0.3
ALFQ53S48 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
ALFQ53S48 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ALFQ53S48 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
ALFQ53S48 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ALFQ53S48 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.95■□□□□ 0.3
ALFQ53S48 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.95■□□□□ 0.3
ALFQ53S48 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ALFQ53S48 AC092183.1-201ENST00000469884 875 ntBASIC16.95■□□□□ 0.3
ALFQ53S48 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.95■□□□□ 0.3
ALFQ53S48 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.95■□□□□ 0.3
ALFQ53S48 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.95■□□□□ 0.3
ALFQ53S48 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ALFQ53S48 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
ALFQ53S48 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.95■□□□□ 0.3
ALFQ53S48 AP000842.3-202ENST00000569238 1080 ntBASIC16.95■□□□□ 0.3
ALFQ53S48 AC073389.1-201ENST00000595595 795 ntBASIC16.95■□□□□ 0.3
ALFQ53S48 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.95■□□□□ 0.3
ALFQ53S48 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.95■□□□□ 0.3
ALFQ53S48 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
ALFQ53S48 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
ALFQ53S48 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ALFQ53S48 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ALFQ53S48 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
ALFQ53S48 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ALFQ53S48 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ALFQ53S48 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ALFQ53S48 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ALFQ53S48 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ALFQ53S48 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.95■□□□□ 0.3
ALFQ53S48 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.95■□□□□ 0.3
ALFQ53S48 UXT-AS1-201ENST00000590504 1525 ntBASIC16.95■□□□□ 0.3
ALFQ53S48 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ALFQ53S48 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
ALFQ53S48 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ALFQ53S48 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
ALFQ53S48 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ALFQ53S48 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.95■□□□□ 0.3
ALFQ53S48 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
ALFQ53S48 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
ALFQ53S48 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms