Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 AL390955.2-201ENST00000603032 514 ntBASIC20.21■□□□□ 0.83
ATP2B3Q16720 SPTSSB-204ENST00000617024 1292 ntBASIC20.21■□□□□ 0.83
ATP2B3Q16720 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ATP2B3Q16720 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ATP2B3Q16720 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP2B3Q16720 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC20.21■□□□□ 0.83
ATP2B3Q16720 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP2B3Q16720 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
ATP2B3Q16720 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
ATP2B3Q16720 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
ATP2B3Q16720 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP2B3Q16720 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP2B3Q16720 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ATP2B3Q16720 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP2B3Q16720 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC20.21■□□□□ 0.83
ATP2B3Q16720 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ATP2B3Q16720 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
ATP2B3Q16720 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.83
ATP2B3Q16720 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP2B3Q16720 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP2B3Q16720 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP2B3Q16720 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP2B3Q16720 HLA-A-202ENST00000376806 1854 ntBASIC20.2■□□□□ 0.82
ATP2B3Q16720 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP2B3Q16720 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP2B3Q16720 GOLGA2P9-201ENST00000596977 1937 ntBASIC20.2■□□□□ 0.82
ATP2B3Q16720 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ATP2B3Q16720 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
ATP2B3Q16720 AC107890.1-201ENST00000422478 521 ntBASIC20.2■□□□□ 0.82
ATP2B3Q16720 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC20.2■□□□□ 0.82
ATP2B3Q16720 PPP6R2P1-201ENST00000450880 1275 ntBASIC20.2■□□□□ 0.82
ATP2B3Q16720 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC20.2■□□□□ 0.82
ATP2B3Q16720 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC20.2■□□□□ 0.82
ATP2B3Q16720 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC20.2■□□□□ 0.82
ATP2B3Q16720 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC20.2■□□□□ 0.82
ATP2B3Q16720 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC20.2■□□□□ 0.82
ATP2B3Q16720 MIR4453-201ENST00000584019 89 ntBASIC20.2■□□□□ 0.82
ATP2B3Q16720 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC20.2■□□□□ 0.82
ATP2B3Q16720 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
ATP2B3Q16720 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ATP2B3Q16720 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC20.2■□□□□ 0.82
ATP2B3Q16720 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ATP2B3Q16720 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP2B3Q16720 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP2B3Q16720 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC20.2■□□□□ 0.82
ATP2B3Q16720 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ATP2B3Q16720 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP2B3Q16720 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP2B3Q16720 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
ATP2B3Q16720 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
ATP2B3Q16720 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC20.2■□□□□ 0.82
ATP2B3Q16720 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP2B3Q16720 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC20.2■□□□□ 0.82
ATP2B3Q16720 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP2B3Q16720 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP2B3Q16720 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP2B3Q16720 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC20.19■□□□□ 0.82
ATP2B3Q16720 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
ATP2B3Q16720 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC20.19■□□□□ 0.82
ATP2B3Q16720 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC20.19■□□□□ 0.82
ATP2B3Q16720 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP2B3Q16720 HLA-H-201ENST00000383620 1096 ntBASIC20.19■□□□□ 0.82
ATP2B3Q16720 AC093724.1-201ENST00000448659 1027 ntBASIC20.19■□□□□ 0.82
ATP2B3Q16720 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC20.19■□□□□ 0.82
ATP2B3Q16720 FHL2-212ENST00000607522 759 ntTSL 2 BASIC20.19■□□□□ 0.82
ATP2B3Q16720 AC018529.1-201ENST00000613063 361 ntBASIC20.19■□□□□ 0.82
ATP2B3Q16720 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ATP2B3Q16720 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP2B3Q16720 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP2B3Q16720 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP2B3Q16720 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP2B3Q16720 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP2B3Q16720 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP2B3Q16720 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP2B3Q16720 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
ATP2B3Q16720 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP2B3Q16720 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
ATP2B3Q16720 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC20.19■□□□□ 0.82
ATP2B3Q16720 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC20.19■□□□□ 0.82
ATP2B3Q16720 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
ATP2B3Q16720 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC20.19■□□□□ 0.82
ATP2B3Q16720 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP2B3Q16720 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ATP2B3Q16720 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATP2B3Q16720 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATP2B3Q16720 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC20.18■□□□□ 0.82
ATP2B3Q16720 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ATP2B3Q16720 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ATP2B3Q16720 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ATP2B3Q16720 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
ATP2B3Q16720 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ATP2B3Q16720 FAM220BP-201ENST00000377689 816 ntBASIC20.18■□□□□ 0.82
ATP2B3Q16720 BAD-202ENST00000394531 631 ntTSL 3 BASIC20.18■□□□□ 0.82
ATP2B3Q16720 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC20.18■□□□□ 0.82
ATP2B3Q16720 MIR943-201ENST00000401286 94 ntBASIC20.18■□□□□ 0.82
ATP2B3Q16720 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
ATP2B3Q16720 AC098859.1-201ENST00000502915 1238 ntBASIC20.18■□□□□ 0.82
ATP2B3Q16720 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC20.18■□□□□ 0.82
ATP2B3Q16720 BAD-207ENST00000544785 525 ntTSL 3 BASIC20.18■□□□□ 0.82
ATP2B3Q16720 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms