Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 Z97205.2-201ENST00000564697 1639 ntBASIC20.24■□□□□ 0.83
DDR1Q08345 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.24■□□□□ 0.83
DDR1Q08345 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
DDR1Q08345 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC20.24■□□□□ 0.83
DDR1Q08345 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
DDR1Q08345 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
DDR1Q08345 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC20.24■□□□□ 0.83
DDR1Q08345 AC004945.1-201ENST00000416738 983 ntBASIC20.24■□□□□ 0.83
DDR1Q08345 ACTG1P3-201ENST00000431775 1114 ntBASIC20.24■□□□□ 0.83
DDR1Q08345 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
DDR1Q08345 AC099548.2-209ENST00000480264 625 ntBASIC20.24■□□□□ 0.83
DDR1Q08345 RNA5SP412-201ENST00000516234 123 ntBASIC20.24■□□□□ 0.83
DDR1Q08345 IGHV3OR16-16-201ENST00000563644 343 ntBASIC20.24■□□□□ 0.83
DDR1Q08345 CU634019.7-201ENST00000624153 1185 ntBASIC20.24■□□□□ 0.83
DDR1Q08345 FP236241.2-201ENST00000624906 1185 ntBASIC20.24■□□□□ 0.83
DDR1Q08345 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC20.24■□□□□ 0.83
DDR1Q08345 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
DDR1Q08345 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
DDR1Q08345 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
DDR1Q08345 KRT8P22-201ENST00000562317 1415 ntBASIC20.24■□□□□ 0.83
DDR1Q08345 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
DDR1Q08345 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
DDR1Q08345 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC20.24■□□□□ 0.83
DDR1Q08345 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC20.24■□□□□ 0.83
DDR1Q08345 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC20.24■□□□□ 0.83
DDR1Q08345 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
DDR1Q08345 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC20.23■□□□□ 0.83
DDR1Q08345 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
DDR1Q08345 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
DDR1Q08345 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20.23■□□□□ 0.83
DDR1Q08345 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.23■□□□□ 0.83
DDR1Q08345 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
DDR1Q08345 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
DDR1Q08345 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
DDR1Q08345 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC20.23■□□□□ 0.83
DDR1Q08345 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC20.23■□□□□ 0.83
DDR1Q08345 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC20.23■□□□□ 0.83
DDR1Q08345 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC20.23■□□□□ 0.83
DDR1Q08345 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC20.23■□□□□ 0.83
DDR1Q08345 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
DDR1Q08345 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC20.23■□□□□ 0.83
DDR1Q08345 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC20.23■□□□□ 0.83
DDR1Q08345 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC20.23■□□□□ 0.83
DDR1Q08345 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
DDR1Q08345 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
DDR1Q08345 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
DDR1Q08345 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
DDR1Q08345 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
DDR1Q08345 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
DDR1Q08345 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
DDR1Q08345 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
DDR1Q08345 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
DDR1Q08345 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
DDR1Q08345 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DDR1Q08345 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
DDR1Q08345 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
DDR1Q08345 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DDR1Q08345 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
DDR1Q08345 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
DDR1Q08345 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DDR1Q08345 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DDR1Q08345 AL442647.2-201ENST00000429864 857 ntBASIC20.22■□□□□ 0.83
DDR1Q08345 BCRP2-202ENST00000447763 634 ntBASIC20.22■□□□□ 0.83
DDR1Q08345 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC20.22■□□□□ 0.83
DDR1Q08345 BCRP6-201ENST00000510112 632 ntBASIC20.22■□□□□ 0.83
DDR1Q08345 BCRP7-201ENST00000511549 544 ntBASIC20.22■□□□□ 0.83
DDR1Q08345 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC20.22■□□□□ 0.83
DDR1Q08345 TDH-203ENST00000531764 1110 ntBASIC20.22■□□□□ 0.83
DDR1Q08345 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC20.22■□□□□ 0.83
DDR1Q08345 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.22■□□□□ 0.83
DDR1Q08345 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC20.22■□□□□ 0.83
DDR1Q08345 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
DDR1Q08345 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC20.22■□□□□ 0.83
DDR1Q08345 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC20.22■□□□□ 0.83
DDR1Q08345 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
DDR1Q08345 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DDR1Q08345 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
DDR1Q08345 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DDR1Q08345 AL390961.4-201ENST00000623958 2535 ntBASIC20.21■□□□□ 0.83
DDR1Q08345 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC20.21■□□□□ 0.83
DDR1Q08345 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC20.21■□□□□ 0.83
DDR1Q08345 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DDR1Q08345 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC20.21■□□□□ 0.83
DDR1Q08345 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DDR1Q08345 BRWD1P1-201ENST00000401091 371 ntBASIC20.21■□□□□ 0.83
DDR1Q08345 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
DDR1Q08345 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
DDR1Q08345 AL162726.2-201ENST00000438986 1017 ntBASIC20.21■□□□□ 0.83
DDR1Q08345 ZNF767P-206ENST00000513792 565 ntBASIC20.21■□□□□ 0.83
DDR1Q08345 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC20.21■□□□□ 0.83
DDR1Q08345 SUOX-214ENST00000551841 906 ntTSL 3 BASIC20.21■□□□□ 0.83
DDR1Q08345 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC20.21■□□□□ 0.83
DDR1Q08345 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
DDR1Q08345 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC20.21■□□□□ 0.83
DDR1Q08345 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
DDR1Q08345 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.21■□□□□ 0.83
DDR1Q08345 GATB-213ENST00000515812 1893 ntTSL 5 BASIC20.21■□□□□ 0.83
DDR1Q08345 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
DDR1Q08345 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
DDR1Q08345 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms