Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.26■□□□□ 0.35
IRX4P78413 WBP2-203ENST00000433525 928 ntTSL 2 BASIC17.26■□□□□ 0.35
IRX4P78413 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
IRX4P78413 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
IRX4P78413 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.26■□□□□ 0.35
IRX4P78413 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.26■□□□□ 0.35
IRX4P78413 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.26■□□□□ 0.35
IRX4P78413 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
IRX4P78413 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IRX4P78413 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IRX4P78413 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IRX4P78413 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
IRX4P78413 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.26■□□□□ 0.35
IRX4P78413 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.26■□□□□ 0.35
IRX4P78413 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
IRX4P78413 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
IRX4P78413 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.26■□□□□ 0.35
IRX4P78413 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IRX4P78413 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IRX4P78413 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
IRX4P78413 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IRX4P78413 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
IRX4P78413 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
IRX4P78413 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
IRX4P78413 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IRX4P78413 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
IRX4P78413 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
IRX4P78413 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.25■□□□□ 0.35
IRX4P78413 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IRX4P78413 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
IRX4P78413 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
IRX4P78413 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
IRX4P78413 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IRX4P78413 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IRX4P78413 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
IRX4P78413 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.25■□□□□ 0.35
IRX4P78413 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
IRX4P78413 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
IRX4P78413 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IRX4P78413 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IRX4P78413 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IRX4P78413 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.25■□□□□ 0.35
IRX4P78413 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
IRX4P78413 KLF4P1-201ENST00000412782 1185 ntBASIC17.25■□□□□ 0.35
IRX4P78413 AC092474.2-201ENST00000424288 719 ntBASIC17.25■□□□□ 0.35
IRX4P78413 RHOQP3-201ENST00000437982 621 ntBASIC17.25■□□□□ 0.35
IRX4P78413 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.25■□□□□ 0.35
IRX4P78413 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.25■□□□□ 0.35
IRX4P78413 AC002558.1-201ENST00000488906 803 ntBASIC17.25■□□□□ 0.35
IRX4P78413 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
IRX4P78413 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.25■□□□□ 0.35
IRX4P78413 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.25■□□□□ 0.35
IRX4P78413 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.25■□□□□ 0.35
IRX4P78413 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.25■□□□□ 0.35
IRX4P78413 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.25■□□□□ 0.35
IRX4P78413 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.25■□□□□ 0.35
IRX4P78413 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.25■□□□□ 0.35
IRX4P78413 AC004835.2-201ENST00000603762 682 ntBASIC17.25■□□□□ 0.35
IRX4P78413 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
IRX4P78413 AL805961.1-202ENST00000641562 540 ntBASIC17.25■□□□□ 0.35
IRX4P78413 AC078925.2-201ENST00000624013 1973 ntBASIC17.25■□□□□ 0.35
IRX4P78413 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IRX4P78413 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IRX4P78413 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
IRX4P78413 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.25■□□□□ 0.35
IRX4P78413 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
IRX4P78413 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IRX4P78413 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IRX4P78413 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
IRX4P78413 AL603756.1-201ENST00000606511 2163 ntBASIC17.25■□□□□ 0.35
IRX4P78413 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
IRX4P78413 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.25■□□□□ 0.35
IRX4P78413 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IRX4P78413 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
IRX4P78413 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
IRX4P78413 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IRX4P78413 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IRX4P78413 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.24■□□□□ 0.35
IRX4P78413 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
IRX4P78413 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.24■□□□□ 0.35
IRX4P78413 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IRX4P78413 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IRX4P78413 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
IRX4P78413 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.24■□□□□ 0.35
IRX4P78413 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.24■□□□□ 0.35
IRX4P78413 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
IRX4P78413 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
IRX4P78413 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.24■□□□□ 0.35
IRX4P78413 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
IRX4P78413 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.24■□□□□ 0.35
IRX4P78413 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.24■□□□□ 0.35
IRX4P78413 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
IRX4P78413 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.24■□□□□ 0.35
IRX4P78413 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.24■□□□□ 0.35
IRX4P78413 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.24■□□□□ 0.35
IRX4P78413 AC109462.3-201ENST00000573934 613 ntBASIC17.24■□□□□ 0.35
IRX4P78413 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.24■□□□□ 0.35
IRX4P78413 AC091812.2-201ENST00000619081 385 ntBASIC17.24■□□□□ 0.35
IRX4P78413 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.24■□□□□ 0.35
IRX4P78413 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms