Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC18.65■□□□□ 0.58
CCNA1P78396 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC18.65■□□□□ 0.58
CCNA1P78396 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC18.65■□□□□ 0.58
CCNA1P78396 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCNA1P78396 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC18.65■□□□□ 0.58
CCNA1P78396 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCNA1P78396 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC18.65■□□□□ 0.58
CCNA1P78396 RAB43P1-201ENST00000561790 589 ntBASIC18.65■□□□□ 0.58
CCNA1P78396 AL109936.8-201ENST00000641772 604 ntBASIC18.65■□□□□ 0.58
CCNA1P78396 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.65■□□□□ 0.58
CCNA1P78396 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CCNA1P78396 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCNA1P78396 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCNA1P78396 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CCNA1P78396 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.65■□□□□ 0.58
CCNA1P78396 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCNA1P78396 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CCNA1P78396 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCNA1P78396 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CCNA1P78396 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC18.65■□□□□ 0.58
CCNA1P78396 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCNA1P78396 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC18.64■□□□□ 0.58
CCNA1P78396 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.64■□□□□ 0.58
CCNA1P78396 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
CCNA1P78396 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCNA1P78396 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.64■□□□□ 0.58
CCNA1P78396 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCNA1P78396 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC18.64■□□□□ 0.57
CCNA1P78396 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCNA1P78396 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCNA1P78396 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCNA1P78396 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
CCNA1P78396 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCNA1P78396 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC18.64■□□□□ 0.57
CCNA1P78396 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC18.64■□□□□ 0.57
CCNA1P78396 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC18.64■□□□□ 0.57
CCNA1P78396 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CCNA1P78396 MXI1-205ENST00000393134 889 ntTSL 2 BASIC18.64■□□□□ 0.57
CCNA1P78396 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC18.64■□□□□ 0.57
CCNA1P78396 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC18.64■□□□□ 0.57
CCNA1P78396 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC18.64■□□□□ 0.57
CCNA1P78396 KRT17P8-201ENST00000540749 863 ntBASIC18.64■□□□□ 0.57
CCNA1P78396 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCNA1P78396 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC18.64■□□□□ 0.57
CCNA1P78396 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCNA1P78396 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
CCNA1P78396 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CCNA1P78396 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CCNA1P78396 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC18.64■□□□□ 0.57
CCNA1P78396 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCNA1P78396 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.64■□□□□ 0.57
CCNA1P78396 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCNA1P78396 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCNA1P78396 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCNA1P78396 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCNA1P78396 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CCNA1P78396 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
CCNA1P78396 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCNA1P78396 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC18.63■□□□□ 0.57
CCNA1P78396 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.63■□□□□ 0.57
CCNA1P78396 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCNA1P78396 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CCNA1P78396 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCNA1P78396 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCNA1P78396 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCNA1P78396 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC18.63■□□□□ 0.57
CCNA1P78396 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
CCNA1P78396 TTTY23B-201ENST00000442790 549 ntBASIC18.63■□□□□ 0.57
CCNA1P78396 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.63■□□□□ 0.57
CCNA1P78396 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC18.63■□□□□ 0.57
CCNA1P78396 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC18.63■□□□□ 0.57
CCNA1P78396 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCNA1P78396 AC123567.1-201ENST00000548294 1261 ntBASIC18.63■□□□□ 0.57
CCNA1P78396 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC18.63■□□□□ 0.57
CCNA1P78396 AC093726.1-201ENST00000608064 963 ntBASIC18.63■□□□□ 0.57
CCNA1P78396 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC18.63■□□□□ 0.57
CCNA1P78396 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC18.63■□□□□ 0.57
CCNA1P78396 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCNA1P78396 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CCNA1P78396 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCNA1P78396 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
CCNA1P78396 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CCNA1P78396 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCNA1P78396 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCNA1P78396 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCNA1P78396 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCNA1P78396 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCNA1P78396 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.63■□□□□ 0.57
CCNA1P78396 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCNA1P78396 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CCNA1P78396 AL031731.1-201ENST00000642131 2094 ntBASIC18.62■□□□□ 0.57
CCNA1P78396 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCNA1P78396 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CCNA1P78396 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CCNA1P78396 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCNA1P78396 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCNA1P78396 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CCNA1P78396 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CCNA1P78396 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCNA1P78396 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms