Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
ABCA4P78363 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ABCA4P78363 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.18□□□□□ -0.14
ABCA4P78363 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.18□□□□□ -0.14
ABCA4P78363 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ABCA4P78363 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.18□□□□□ -0.14
ABCA4P78363 AL844908.2-201ENST00000609461 460 ntBASIC14.18□□□□□ -0.14
ABCA4P78363 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ABCA4P78363 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ABCA4P78363 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.18□□□□□ -0.14
ABCA4P78363 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ABCA4P78363 NFIC-211ENST00000641145 8399 ntBASIC14.18□□□□□ -0.14
ABCA4P78363 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ABCA4P78363 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ABCA4P78363 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ABCA4P78363 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.18□□□□□ -0.14
ABCA4P78363 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ABCA4P78363 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ABCA4P78363 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.18□□□□□ -0.14
ABCA4P78363 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
ABCA4P78363 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
ABCA4P78363 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
ABCA4P78363 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ABCA4P78363 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
ABCA4P78363 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ABCA4P78363 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.17□□□□□ -0.14
ABCA4P78363 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.17□□□□□ -0.14
ABCA4P78363 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ABCA4P78363 AC092658.1-201ENST00000505836 891 ntBASIC14.17□□□□□ -0.14
ABCA4P78363 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.17□□□□□ -0.14
ABCA4P78363 ZNF890P-202ENST00000530367 1156 ntBASIC14.17□□□□□ -0.14
ABCA4P78363 AL079307.3-201ENST00000556114 283 ntBASIC14.17□□□□□ -0.14
ABCA4P78363 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.17□□□□□ -0.14
ABCA4P78363 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.17□□□□□ -0.14
ABCA4P78363 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.17□□□□□ -0.14
ABCA4P78363 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC14.17□□□□□ -0.14
ABCA4P78363 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.17□□□□□ -0.14
ABCA4P78363 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.17□□□□□ -0.14
ABCA4P78363 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ABCA4P78363 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
ABCA4P78363 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
ABCA4P78363 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC14.17□□□□□ -0.14
ABCA4P78363 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
ABCA4P78363 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.17□□□□□ -0.14
ABCA4P78363 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ABCA4P78363 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
ABCA4P78363 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ABCA4P78363 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ABCA4P78363 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ABCA4P78363 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ABCA4P78363 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.17□□□□□ -0.14
ABCA4P78363 HYMAI-201ENST00000635591 3347 ntBASIC14.17□□□□□ -0.14
ABCA4P78363 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ABCA4P78363 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ABCA4P78363 PGF-202ENST00000405431 666 ntTSL 5 BASIC14.17□□□□□ -0.14
ABCA4P78363 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.17□□□□□ -0.14
ABCA4P78363 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ABCA4P78363 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC14.17□□□□□ -0.14
ABCA4P78363 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.17□□□□□ -0.14
ABCA4P78363 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC14.17□□□□□ -0.14
ABCA4P78363 AL133215.2-201ENST00000609242 977 ntBASIC14.17□□□□□ -0.14
ABCA4P78363 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ABCA4P78363 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
ABCA4P78363 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ABCA4P78363 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
ABCA4P78363 KRT8P12-202ENST00000472924 1397 ntBASIC14.17□□□□□ -0.14
ABCA4P78363 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC14.17□□□□□ -0.14
ABCA4P78363 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
ABCA4P78363 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ABCA4P78363 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ABCA4P78363 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC14.17□□□□□ -0.14
ABCA4P78363 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
ABCA4P78363 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
ABCA4P78363 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
ABCA4P78363 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
ABCA4P78363 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
ABCA4P78363 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ABCA4P78363 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14.16□□□□□ -0.14
ABCA4P78363 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.16□□□□□ -0.14
ABCA4P78363 AC007389.4-201ENST00000454674 793 ntBASIC14.16□□□□□ -0.14
ABCA4P78363 RN7SL837P-201ENST00000463010 287 ntBASIC14.16□□□□□ -0.14
ABCA4P78363 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ABCA4P78363 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC14.16□□□□□ -0.14
ABCA4P78363 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.16□□□□□ -0.14
ABCA4P78363 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
ABCA4P78363 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ABCA4P78363 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
ABCA4P78363 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ABCA4P78363 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.16□□□□□ -0.14
ABCA4P78363 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.16□□□□□ -0.14
ABCA4P78363 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.16□□□□□ -0.14
ABCA4P78363 AL645728.1-201ENST00000366221 2101 ntBASIC14.16□□□□□ -0.14
ABCA4P78363 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.16□□□□□ -0.14
ABCA4P78363 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC14.16□□□□□ -0.14
ABCA4P78363 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ABCA4P78363 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
ABCA4P78363 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
ABCA4P78363 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ABCA4P78363 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ABCA4P78363 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms