Protein–RNA interactions for Protein: P61018

RAB4B, Ras-related protein Rab-4B, humanhuman

Predictions only

Length 213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4BP61018 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RAB4BP61018 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC12.95□□□□□ -0.34
RAB4BP61018 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
RAB4BP61018 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RAB4BP61018 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC12.95□□□□□ -0.34
RAB4BP61018 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
RAB4BP61018 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB4BP61018 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC12.94□□□□□ -0.34
RAB4BP61018 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB4BP61018 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
RAB4BP61018 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB4BP61018 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB4BP61018 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB4BP61018 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB4BP61018 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB4BP61018 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
RAB4BP61018 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
RAB4BP61018 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB4BP61018 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB4BP61018 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC12.94□□□□□ -0.34
RAB4BP61018 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB4BP61018 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB4BP61018 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB4BP61018 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC12.94□□□□□ -0.34
RAB4BP61018 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
RAB4BP61018 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
RAB4BP61018 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RAB4BP61018 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB4BP61018 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB4BP61018 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB4BP61018 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
RAB4BP61018 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RAB4BP61018 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC12.94□□□□□ -0.34
RAB4BP61018 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB4BP61018 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC12.94□□□□□ -0.34
RAB4BP61018 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC12.94□□□□□ -0.34
RAB4BP61018 GRAMD4P1-201ENST00000435181 1110 ntBASIC12.94□□□□□ -0.34
RAB4BP61018 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC12.94□□□□□ -0.34
RAB4BP61018 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RAB4BP61018 AC233702.5-201ENST00000584107 538 ntBASIC12.94□□□□□ -0.34
RAB4BP61018 AC008687.5-201ENST00000593746 558 ntBASIC12.94□□□□□ -0.34
RAB4BP61018 AL023803.3-201ENST00000615559 522 ntBASIC12.94□□□□□ -0.34
RAB4BP61018 CR769767.2-201ENST00000622735 460 ntBASIC12.94□□□□□ -0.34
RAB4BP61018 AC112497.1-201ENST00000624824 639 ntBASIC12.94□□□□□ -0.34
RAB4BP61018 AL049637.2-201ENST00000641778 930 ntBASIC12.94□□□□□ -0.34
RAB4BP61018 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC12.94□□□□□ -0.34
RAB4BP61018 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB4BP61018 AC013268.4-201ENST00000637413 2228 ntBASIC12.94□□□□□ -0.34
RAB4BP61018 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB4BP61018 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB4BP61018 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RAB4BP61018 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RAB4BP61018 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB4BP61018 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC12.94□□□□□ -0.34
RAB4BP61018 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC12.94□□□□□ -0.34
RAB4BP61018 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB4BP61018 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC12.94□□□□□ -0.34
RAB4BP61018 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
RAB4BP61018 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
RAB4BP61018 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RAB4BP61018 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RAB4BP61018 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RAB4BP61018 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
RAB4BP61018 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
RAB4BP61018 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB4BP61018 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC12.93□□□□□ -0.34
RAB4BP61018 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
RAB4BP61018 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
RAB4BP61018 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB4BP61018 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC12.93□□□□□ -0.34
RAB4BP61018 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB4BP61018 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB4BP61018 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB4BP61018 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB4BP61018 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB4BP61018 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB4BP61018 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB4BP61018 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
RAB4BP61018 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB4BP61018 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB4BP61018 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC12.93□□□□□ -0.34
RAB4BP61018 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB4BP61018 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB4BP61018 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC12.93□□□□□ -0.34
RAB4BP61018 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC12.93□□□□□ -0.34
RAB4BP61018 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB4BP61018 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RAB4BP61018 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB4BP61018 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB4BP61018 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RAB4BP61018 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
RAB4BP61018 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
RAB4BP61018 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC12.93□□□□□ -0.34
RAB4BP61018 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC12.93□□□□□ -0.34
RAB4BP61018 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC12.93□□□□□ -0.34
RAB4BP61018 PENK-204ENST00000518770 863 ntTSL 2 BASIC12.93□□□□□ -0.34
RAB4BP61018 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC12.93□□□□□ -0.34
RAB4BP61018 BX088651.1-201ENST00000540551 451 ntBASIC12.93□□□□□ -0.34
RAB4BP61018 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC12.93□□□□□ -0.34
RAB4BP61018 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms