Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SPCS3P61009 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC13.53□□□□□ -0.24
SPCS3P61009 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC13.53□□□□□ -0.24
SPCS3P61009 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SPCS3P61009 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC13.52□□□□□ -0.24
SPCS3P61009 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SPCS3P61009 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
SPCS3P61009 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SPCS3P61009 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SPCS3P61009 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC13.52□□□□□ -0.24
SPCS3P61009 AL359183.1-201ENST00000623796 2132 ntBASIC13.52□□□□□ -0.24
SPCS3P61009 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SPCS3P61009 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
SPCS3P61009 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
SPCS3P61009 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.24
SPCS3P61009 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SPCS3P61009 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.52□□□□□ -0.24
SPCS3P61009 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
SPCS3P61009 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.52□□□□□ -0.24
SPCS3P61009 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
SPCS3P61009 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
SPCS3P61009 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SPCS3P61009 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SPCS3P61009 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SPCS3P61009 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SPCS3P61009 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC13.52□□□□□ -0.25
SPCS3P61009 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC13.52□□□□□ -0.25
SPCS3P61009 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SPCS3P61009 POM121L3P-201ENST00000419331 1163 ntBASIC13.52□□□□□ -0.25
SPCS3P61009 DRAXINP1-201ENST00000437611 948 ntBASIC13.52□□□□□ -0.25
SPCS3P61009 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
SPCS3P61009 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC13.52□□□□□ -0.25
SPCS3P61009 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SPCS3P61009 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC13.52□□□□□ -0.25
SPCS3P61009 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC13.52□□□□□ -0.25
SPCS3P61009 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
SPCS3P61009 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
SPCS3P61009 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC13.52□□□□□ -0.25
SPCS3P61009 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC13.52□□□□□ -0.25
SPCS3P61009 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC13.52□□□□□ -0.25
SPCS3P61009 AC114341.1-201ENST00000618070 349 ntBASIC13.52□□□□□ -0.25
SPCS3P61009 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SPCS3P61009 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SPCS3P61009 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC13.52□□□□□ -0.25
SPCS3P61009 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SPCS3P61009 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SPCS3P61009 AC243591.1-201ENST00000452967 1364 ntBASIC13.52□□□□□ -0.25
SPCS3P61009 AC002310.6-201ENST00000624451 1377 ntBASIC13.52□□□□□ -0.25
SPCS3P61009 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SPCS3P61009 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SPCS3P61009 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC13.52□□□□□ -0.25
SPCS3P61009 NSUN5P1-202ENST00000421140 1535 ntBASIC13.52□□□□□ -0.25
SPCS3P61009 NSUN5P2-203ENST00000457352 1529 ntBASIC13.52□□□□□ -0.25
SPCS3P61009 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
SPCS3P61009 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC13.52□□□□□ -0.25
SPCS3P61009 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC13.52□□□□□ -0.25
SPCS3P61009 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
SPCS3P61009 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SPCS3P61009 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SPCS3P61009 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC13.52□□□□□ -0.25
SPCS3P61009 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SPCS3P61009 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SPCS3P61009 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
SPCS3P61009 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SPCS3P61009 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC13.52□□□□□ -0.25
SPCS3P61009 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
SPCS3P61009 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SPCS3P61009 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SPCS3P61009 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SPCS3P61009 AL365209.1-201ENST00000624418 6473 ntBASIC13.51□□□□□ -0.25
SPCS3P61009 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.51□□□□□ -0.25
SPCS3P61009 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SPCS3P61009 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.51□□□□□ -0.25
SPCS3P61009 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
SPCS3P61009 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SPCS3P61009 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
SPCS3P61009 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SPCS3P61009 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SPCS3P61009 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC13.51□□□□□ -0.25
SPCS3P61009 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC13.51□□□□□ -0.25
SPCS3P61009 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SPCS3P61009 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SPCS3P61009 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC13.51□□□□□ -0.25
SPCS3P61009 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
SPCS3P61009 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SPCS3P61009 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SPCS3P61009 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC13.51□□□□□ -0.25
SPCS3P61009 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.51□□□□□ -0.25
SPCS3P61009 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC13.51□□□□□ -0.25
SPCS3P61009 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SPCS3P61009 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC13.51□□□□□ -0.25
SPCS3P61009 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SPCS3P61009 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SPCS3P61009 GID4-202ENST00000376345 1391 ntTSL 3 BASIC13.51□□□□□ -0.25
SPCS3P61009 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
SPCS3P61009 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SPCS3P61009 PPIH-202ENST00000372549 327 ntTSL 3 BASIC13.51□□□□□ -0.25
SPCS3P61009 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
SPCS3P61009 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SPCS3P61009 TSSC2-201ENST00000450217 709 ntBASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms