Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC19.33■□□□□ 0.69
RHBDL3P58872 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RHBDL3P58872 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
RHBDL3P58872 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RHBDL3P58872 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RHBDL3P58872 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RHBDL3P58872 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
RHBDL3P58872 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RHBDL3P58872 AL353779.1-201ENST00000434793 351 ntBASIC19.33■□□□□ 0.68
RHBDL3P58872 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
RHBDL3P58872 CR383656.12-201ENST00000549567 513 ntBASIC19.33■□□□□ 0.68
RHBDL3P58872 AC027307.3-201ENST00000594262 1100 ntBASIC19.33■□□□□ 0.68
RHBDL3P58872 AL365330.1-201ENST00000607459 531 ntBASIC19.33■□□□□ 0.68
RHBDL3P58872 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC19.33■□□□□ 0.68
RHBDL3P58872 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC19.33■□□□□ 0.68
RHBDL3P58872 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC19.33■□□□□ 0.68
RHBDL3P58872 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC19.33■□□□□ 0.68
RHBDL3P58872 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
RHBDL3P58872 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RHBDL3P58872 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RHBDL3P58872 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC19.33■□□□□ 0.68
RHBDL3P58872 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC19.33■□□□□ 0.68
RHBDL3P58872 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RHBDL3P58872 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RHBDL3P58872 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.33■□□□□ 0.68
RHBDL3P58872 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
RHBDL3P58872 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RHBDL3P58872 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RHBDL3P58872 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RHBDL3P58872 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RHBDL3P58872 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC19.32■□□□□ 0.68
RHBDL3P58872 AC106886.4-201ENST00000623557 2502 ntBASIC19.32■□□□□ 0.68
RHBDL3P58872 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
RHBDL3P58872 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.32■□□□□ 0.68
RHBDL3P58872 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
RHBDL3P58872 CYP4F24P-201ENST00000586049 1580 ntBASIC19.32■□□□□ 0.68
RHBDL3P58872 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
RHBDL3P58872 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RHBDL3P58872 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC19.32■□□□□ 0.68
RHBDL3P58872 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
RHBDL3P58872 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RHBDL3P58872 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC19.32■□□□□ 0.68
RHBDL3P58872 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC19.32■□□□□ 0.68
RHBDL3P58872 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RHBDL3P58872 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
RHBDL3P58872 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC19.32■□□□□ 0.68
RHBDL3P58872 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RHBDL3P58872 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC19.32■□□□□ 0.68
RHBDL3P58872 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC19.32■□□□□ 0.68
RHBDL3P58872 PAM16-215ENST00000577031 548 ntTSL 4 BASIC19.32■□□□□ 0.68
RHBDL3P58872 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC19.32■□□□□ 0.68
RHBDL3P58872 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RHBDL3P58872 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
RHBDL3P58872 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
RHBDL3P58872 AC004461.2-201ENST00000629517 803 ntBASIC19.32■□□□□ 0.68
RHBDL3P58872 AL358472.5-202ENST00000641448 1267 ntBASIC19.32■□□□□ 0.68
RHBDL3P58872 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RHBDL3P58872 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RHBDL3P58872 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RHBDL3P58872 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC19.32■□□□□ 0.68
RHBDL3P58872 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
RHBDL3P58872 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RHBDL3P58872 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RHBDL3P58872 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RHBDL3P58872 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RHBDL3P58872 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RHBDL3P58872 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RHBDL3P58872 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RHBDL3P58872 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
RHBDL3P58872 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RHBDL3P58872 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RHBDL3P58872 SPDYE19P-201ENST00000338590 713 ntBASIC19.31■□□□□ 0.68
RHBDL3P58872 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RHBDL3P58872 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC19.31■□□□□ 0.68
RHBDL3P58872 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
RHBDL3P58872 RAD18-204ENST00000418463 563 ntTSL 4 BASIC19.31■□□□□ 0.68
RHBDL3P58872 RAD18-205ENST00000421052 582 ntTSL 3 BASIC19.31■□□□□ 0.68
RHBDL3P58872 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RHBDL3P58872 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC19.31■□□□□ 0.68
RHBDL3P58872 DOC2GP-202ENST00000514950 1163 ntBASIC19.31■□□□□ 0.68
RHBDL3P58872 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC19.31■□□□□ 0.68
RHBDL3P58872 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC19.31■□□□□ 0.68
RHBDL3P58872 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC19.31■□□□□ 0.68
RHBDL3P58872 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC19.31■□□□□ 0.68
RHBDL3P58872 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RHBDL3P58872 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
RHBDL3P58872 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RHBDL3P58872 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RHBDL3P58872 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RHBDL3P58872 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RHBDL3P58872 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC19.31■□□□□ 0.68
RHBDL3P58872 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RHBDL3P58872 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
RHBDL3P58872 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RHBDL3P58872 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
RHBDL3P58872 AC092171.3-201ENST00000610122 2651 ntBASIC19.3■□□□□ 0.68
RHBDL3P58872 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RHBDL3P58872 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
RHBDL3P58872 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
RHBDL3P58872 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms