Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 AC005622.1-201ENST00000636801 1703 ntBASIC17.6■□□□□ 0.41
CDH8P55286 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDH8P55286 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDH8P55286 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.6■□□□□ 0.41
CDH8P55286 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDH8P55286 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDH8P55286 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDH8P55286 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CDH8P55286 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDH8P55286 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDH8P55286 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.59■□□□□ 0.41
CDH8P55286 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.59■□□□□ 0.41
CDH8P55286 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.59■□□□□ 0.41
CDH8P55286 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDH8P55286 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDH8P55286 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.59■□□□□ 0.41
CDH8P55286 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDH8P55286 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDH8P55286 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.59■□□□□ 0.41
CDH8P55286 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
CDH8P55286 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDH8P55286 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDH8P55286 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDH8P55286 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDH8P55286 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CDH8P55286 AL627223.1-201ENST00000416693 442 ntBASIC17.59■□□□□ 0.41
CDH8P55286 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.59■□□□□ 0.41
CDH8P55286 AC093724.1-201ENST00000448659 1027 ntBASIC17.59■□□□□ 0.41
CDH8P55286 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.59■□□□□ 0.41
CDH8P55286 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.59■□□□□ 0.41
CDH8P55286 AP000842.3-202ENST00000569238 1080 ntBASIC17.59■□□□□ 0.41
CDH8P55286 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.59■□□□□ 0.41
CDH8P55286 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.59■□□□□ 0.41
CDH8P55286 AC079781.4-201ENST00000641908 219 ntBASIC17.59■□□□□ 0.41
CDH8P55286 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDH8P55286 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDH8P55286 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.59■□□□□ 0.41
CDH8P55286 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDH8P55286 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDH8P55286 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.59■□□□□ 0.41
CDH8P55286 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDH8P55286 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CDH8P55286 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.59■□□□□ 0.41
CDH8P55286 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.59■□□□□ 0.41
CDH8P55286 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDH8P55286 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CDH8P55286 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
CDH8P55286 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDH8P55286 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDH8P55286 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.59■□□□□ 0.41
CDH8P55286 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDH8P55286 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDH8P55286 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.58■□□□□ 0.41
CDH8P55286 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CDH8P55286 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDH8P55286 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDH8P55286 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDH8P55286 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CDH8P55286 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.58■□□□□ 0.41
CDH8P55286 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDH8P55286 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
CDH8P55286 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDH8P55286 MIR346-201ENST00000362234 95 ntBASIC17.58■□□□□ 0.4
CDH8P55286 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.58■□□□□ 0.4
CDH8P55286 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CDH8P55286 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.58■□□□□ 0.4
CDH8P55286 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.58■□□□□ 0.4
CDH8P55286 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.58■□□□□ 0.4
CDH8P55286 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.58■□□□□ 0.4
CDH8P55286 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.58■□□□□ 0.4
CDH8P55286 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.58■□□□□ 0.4
CDH8P55286 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.58■□□□□ 0.4
CDH8P55286 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.58■□□□□ 0.4
CDH8P55286 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDH8P55286 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.58■□□□□ 0.4
CDH8P55286 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDH8P55286 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.58■□□□□ 0.4
CDH8P55286 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDH8P55286 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
CDH8P55286 SLC25A39P2-201ENST00000537614 270 ntBASIC17.58■□□□□ 0.4
CDH8P55286 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
CDH8P55286 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
CDH8P55286 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
CDH8P55286 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.58■□□□□ 0.4
CDH8P55286 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.58■□□□□ 0.4
CDH8P55286 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDH8P55286 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDH8P55286 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.58■□□□□ 0.4
CDH8P55286 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
CDH8P55286 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.58■□□□□ 0.4
CDH8P55286 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDH8P55286 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDH8P55286 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.58■□□□□ 0.4
CDH8P55286 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDH8P55286 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDH8P55286 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDH8P55286 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDH8P55286 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDH8P55286 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.58■□□□□ 0.4
CDH8P55286 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms