Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH4P55283 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDH4P55283 SPDYE14P-201ENST00000442619 822 ntBASIC16.84■□□□□ 0.29
CDH4P55283 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.84■□□□□ 0.29
CDH4P55283 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CDH4P55283 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDH4P55283 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.84■□□□□ 0.29
CDH4P55283 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDH4P55283 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CDH4P55283 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
CDH4P55283 AL589702.1-201ENST00000641229 1509 ntBASIC16.84■□□□□ 0.29
CDH4P55283 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
CDH4P55283 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
CDH4P55283 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDH4P55283 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH4P55283 ME2P1-201ENST00000426028 1970 ntBASIC16.84■□□□□ 0.29
CDH4P55283 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.84■□□□□ 0.29
CDH4P55283 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH4P55283 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CDH4P55283 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH4P55283 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
CDH4P55283 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
CDH4P55283 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH4P55283 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH4P55283 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH4P55283 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.83■□□□□ 0.28
CDH4P55283 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDH4P55283 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.83■□□□□ 0.28
CDH4P55283 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDH4P55283 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH4P55283 FAM220BP-201ENST00000377689 816 ntBASIC16.83■□□□□ 0.28
CDH4P55283 HLA-H-201ENST00000383620 1096 ntBASIC16.83■□□□□ 0.28
CDH4P55283 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.83■□□□□ 0.28
CDH4P55283 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.83■□□□□ 0.28
CDH4P55283 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CDH4P55283 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.83■□□□□ 0.28
CDH4P55283 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDH4P55283 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.83■□□□□ 0.28
CDH4P55283 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.83■□□□□ 0.28
CDH4P55283 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
CDH4P55283 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDH4P55283 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.83■□□□□ 0.28
CDH4P55283 RARRES2P9-201ENST00000565168 469 ntBASIC16.83■□□□□ 0.28
CDH4P55283 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.83■□□□□ 0.28
CDH4P55283 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.83■□□□□ 0.28
CDH4P55283 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.83■□□□□ 0.28
CDH4P55283 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.83■□□□□ 0.28
CDH4P55283 AP3S2-216ENST00000617003 1561 ntBASIC16.83■□□□□ 0.28
CDH4P55283 AC093028.1-201ENST00000622998 982 ntBASIC16.83■□□□□ 0.28
CDH4P55283 U82695.1-201ENST00000635752 1889 ntBASIC16.83■□□□□ 0.28
CDH4P55283 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.83■□□□□ 0.28
CDH4P55283 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH4P55283 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH4P55283 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH4P55283 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH4P55283 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.82■□□□□ 0.28
CDH4P55283 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH4P55283 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDH4P55283 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.82■□□□□ 0.28
CDH4P55283 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH4P55283 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CDH4P55283 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDH4P55283 ALOX12P2-203ENST00000570921 1945 ntBASIC16.82■□□□□ 0.28
CDH4P55283 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.82■□□□□ 0.28
CDH4P55283 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH4P55283 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDH4P55283 SPDYE7P-202ENST00000420373 878 ntBASIC16.82■□□□□ 0.28
CDH4P55283 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.82■□□□□ 0.28
CDH4P55283 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.82■□□□□ 0.28
CDH4P55283 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.82■□□□□ 0.28
CDH4P55283 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH4P55283 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CDH4P55283 AC009053.2-201ENST00000563701 2365 ntBASIC16.82■□□□□ 0.28
CDH4P55283 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CDH4P55283 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH4P55283 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH4P55283 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CDH4P55283 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.82■□□□□ 0.28
CDH4P55283 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.82■□□□□ 0.28
CDH4P55283 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.82■□□□□ 0.28
CDH4P55283 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH4P55283 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH4P55283 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH4P55283 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.81■□□□□ 0.28
CDH4P55283 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH4P55283 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.81■□□□□ 0.28
CDH4P55283 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.81■□□□□ 0.28
CDH4P55283 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.81■□□□□ 0.28
CDH4P55283 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CDH4P55283 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CDH4P55283 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
CDH4P55283 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDH4P55283 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH4P55283 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.81■□□□□ 0.28
CDH4P55283 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
CDH4P55283 AL645939.2-201ENST00000427340 991 ntBASIC16.81■□□□□ 0.28
CDH4P55283 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.81■□□□□ 0.28
CDH4P55283 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.81■□□□□ 0.28
CDH4P55283 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.81■□□□□ 0.28
CDH4P55283 AC069262.1-201ENST00000539058 672 ntBASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms