Protein–RNA interactions for Protein: P55212

CASP6, Caspase-6, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6P55212 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CASP6P55212 COMP-202ENST00000425807 2292 ntTSL 2 BASIC14.85□□□□□ -0.03
CASP6P55212 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CASP6P55212 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CASP6P55212 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CASP6P55212 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
CASP6P55212 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CASP6P55212 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CASP6P55212 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.85□□□□□ -0.03
CASP6P55212 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC14.85□□□□□ -0.03
CASP6P55212 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CASP6P55212 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CASP6P55212 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.85□□□□□ -0.03
CASP6P55212 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.85□□□□□ -0.03
CASP6P55212 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.85□□□□□ -0.03
CASP6P55212 HLA-V-204ENST00000476601 1289 ntBASIC14.85□□□□□ -0.03
CASP6P55212 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.85□□□□□ -0.03
CASP6P55212 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.85□□□□□ -0.03
CASP6P55212 PRYP6-201ENST00000514804 343 ntBASIC14.85□□□□□ -0.03
CASP6P55212 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.85□□□□□ -0.03
CASP6P55212 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC14.85□□□□□ -0.03
CASP6P55212 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.85□□□□□ -0.03
CASP6P55212 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.85□□□□□ -0.03
CASP6P55212 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.85□□□□□ -0.03
CASP6P55212 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.85□□□□□ -0.03
CASP6P55212 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CASP6P55212 AL662799.1-202ENST00000614205 422 ntBASIC14.85□□□□□ -0.03
CASP6P55212 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CASP6P55212 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC14.85□□□□□ -0.03
CASP6P55212 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CASP6P55212 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC14.85□□□□□ -0.03
CASP6P55212 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
CASP6P55212 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CASP6P55212 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CASP6P55212 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CASP6P55212 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CASP6P55212 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.85□□□□□ -0.03
CASP6P55212 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CASP6P55212 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.85□□□□□ -0.03
CASP6P55212 AP3S2-216ENST00000617003 1561 ntBASIC14.85□□□□□ -0.03
CASP6P55212 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CASP6P55212 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC14.85□□□□□ -0.03
CASP6P55212 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CASP6P55212 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CASP6P55212 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CASP6P55212 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CASP6P55212 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
CASP6P55212 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CASP6P55212 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CASP6P55212 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
CASP6P55212 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CASP6P55212 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CASP6P55212 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC14.84□□□□□ -0.03
CASP6P55212 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CASP6P55212 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
CASP6P55212 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC14.84□□□□□ -0.03
CASP6P55212 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CASP6P55212 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CASP6P55212 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CASP6P55212 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CASP6P55212 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CASP6P55212 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CASP6P55212 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CASP6P55212 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.84□□□□□ -0.03
CASP6P55212 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.84□□□□□ -0.03
CASP6P55212 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CASP6P55212 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CASP6P55212 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CASP6P55212 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.84□□□□□ -0.03
CASP6P55212 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CASP6P55212 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.84□□□□□ -0.03
CASP6P55212 AL138918.1-201ENST00000568306 659 ntBASIC14.84□□□□□ -0.03
CASP6P55212 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.84□□□□□ -0.03
CASP6P55212 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.84□□□□□ -0.03
CASP6P55212 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CASP6P55212 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CASP6P55212 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CASP6P55212 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.84□□□□□ -0.03
CASP6P55212 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC14.84□□□□□ -0.03
CASP6P55212 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC14.84□□□□□ -0.03
CASP6P55212 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CASP6P55212 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
CASP6P55212 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.84□□□□□ -0.03
CASP6P55212 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CASP6P55212 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CASP6P55212 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CASP6P55212 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CASP6P55212 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CASP6P55212 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CASP6P55212 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CASP6P55212 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CASP6P55212 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CASP6P55212 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CASP6P55212 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CASP6P55212 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
CASP6P55212 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CASP6P55212 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CASP6P55212 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CASP6P55212 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CASP6P55212 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms