Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC12.1□□□□□ -0.47
APOC4P55056 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC12.1□□□□□ -0.47
APOC4P55056 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
APOC4P55056 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
APOC4P55056 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
APOC4P55056 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
APOC4P55056 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
APOC4P55056 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
APOC4P55056 TUBB3P1-201ENST00000405796 1332 ntBASIC12.1□□□□□ -0.47
APOC4P55056 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
APOC4P55056 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
APOC4P55056 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
APOC4P55056 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
APOC4P55056 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
APOC4P55056 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
APOC4P55056 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC12.09□□□□□ -0.47
APOC4P55056 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
APOC4P55056 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
APOC4P55056 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
APOC4P55056 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
APOC4P55056 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC12.09□□□□□ -0.47
APOC4P55056 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC12.09□□□□□ -0.47
APOC4P55056 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
APOC4P55056 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
APOC4P55056 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC12.09□□□□□ -0.47
APOC4P55056 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC12.09□□□□□ -0.47
APOC4P55056 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
APOC4P55056 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
APOC4P55056 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
APOC4P55056 VMA21-202ENST00000370361 693 ntTSL 5 BASIC12.09□□□□□ -0.47
APOC4P55056 MIR770-201ENST00000390219 98 ntBASIC12.09□□□□□ -0.47
APOC4P55056 BAD-202ENST00000394531 631 ntTSL 3 BASIC12.09□□□□□ -0.47
APOC4P55056 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC12.09□□□□□ -0.47
APOC4P55056 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
APOC4P55056 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC12.09□□□□□ -0.47
APOC4P55056 HLA-DRB6-201ENST00000411500 1235 ntBASIC12.09□□□□□ -0.47
APOC4P55056 AC107890.1-201ENST00000422478 521 ntBASIC12.09□□□□□ -0.47
APOC4P55056 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
APOC4P55056 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC12.09□□□□□ -0.47
APOC4P55056 GATD1-206ENST00000526325 756 ntTSL 5 BASIC12.09□□□□□ -0.47
APOC4P55056 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC12.09□□□□□ -0.47
APOC4P55056 BAD-207ENST00000544785 525 ntTSL 3 BASIC12.09□□□□□ -0.47
APOC4P55056 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC12.09□□□□□ -0.47
APOC4P55056 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
APOC4P55056 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC12.09□□□□□ -0.47
APOC4P55056 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC12.09□□□□□ -0.47
APOC4P55056 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
APOC4P55056 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC12.09□□□□□ -0.47
APOC4P55056 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
APOC4P55056 AC060834.1-201ENST00000443027 2032 ntBASIC12.09□□□□□ -0.47
APOC4P55056 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
APOC4P55056 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
APOC4P55056 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
APOC4P55056 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
APOC4P55056 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
APOC4P55056 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
APOC4P55056 AL671710.1-201ENST00000610245 2349 ntBASIC12.09□□□□□ -0.47
APOC4P55056 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
APOC4P55056 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
APOC4P55056 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
APOC4P55056 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
APOC4P55056 CEP83-AS1-201ENST00000623122 2482 ntBASIC12.09□□□□□ -0.47
APOC4P55056 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
APOC4P55056 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC12.08□□□□□ -0.47
APOC4P55056 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
APOC4P55056 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
APOC4P55056 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC12.08□□□□□ -0.48
APOC4P55056 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC12.08□□□□□ -0.48
APOC4P55056 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
APOC4P55056 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
APOC4P55056 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
APOC4P55056 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
APOC4P55056 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
APOC4P55056 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
APOC4P55056 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
APOC4P55056 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
APOC4P55056 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
APOC4P55056 AC126755.1-201ENST00000525846 6405 ntBASIC12.08□□□□□ -0.48
APOC4P55056 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
APOC4P55056 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
APOC4P55056 GRAMD4P3-201ENST00000621665 1669 ntBASIC12.08□□□□□ -0.48
APOC4P55056 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
APOC4P55056 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
APOC4P55056 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
APOC4P55056 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
APOC4P55056 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
APOC4P55056 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
APOC4P55056 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
APOC4P55056 VMO1-203ENST00000416307 712 ntTSL 2 BASIC12.08□□□□□ -0.48
APOC4P55056 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC12.08□□□□□ -0.48
APOC4P55056 AL353705.2-201ENST00000428243 662 ntBASIC12.08□□□□□ -0.48
APOC4P55056 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC12.08□□□□□ -0.48
APOC4P55056 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC12.08□□□□□ -0.48
APOC4P55056 AC098859.1-201ENST00000502915 1238 ntBASIC12.08□□□□□ -0.48
APOC4P55056 RNA5SP421-201ENST00000516864 134 ntBASIC12.08□□□□□ -0.48
APOC4P55056 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC12.08□□□□□ -0.48
APOC4P55056 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC12.08□□□□□ -0.48
APOC4P55056 SPTSSB-204ENST00000617024 1292 ntBASIC12.08□□□□□ -0.48
APOC4P55056 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
APOC4P55056 PCDHB18P-201ENST00000524813 2368 ntBASIC12.08□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms