Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CACNA2D1P54289 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CACNA2D1P54289 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CACNA2D1P54289 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CACNA2D1P54289 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CACNA2D1P54289 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CACNA2D1P54289 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.51■□□□□ 0.39
CACNA2D1P54289 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.51■□□□□ 0.39
CACNA2D1P54289 AC027796.2-201ENST00000575326 344 ntBASIC17.51■□□□□ 0.39
CACNA2D1P54289 AC027307.2-201ENST00000591252 911 ntBASIC17.51■□□□□ 0.39
CACNA2D1P54289 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.51■□□□□ 0.39
CACNA2D1P54289 GGT4P-201ENST00000623672 1708 ntBASIC17.51■□□□□ 0.39
CACNA2D1P54289 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.51■□□□□ 0.39
CACNA2D1P54289 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CACNA2D1P54289 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.51■□□□□ 0.39
CACNA2D1P54289 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CACNA2D1P54289 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CACNA2D1P54289 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
CACNA2D1P54289 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.51■□□□□ 0.39
CACNA2D1P54289 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CACNA2D1P54289 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CACNA2D1P54289 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CACNA2D1P54289 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
CACNA2D1P54289 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CACNA2D1P54289 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CACNA2D1P54289 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CACNA2D1P54289 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.5■□□□□ 0.39
CACNA2D1P54289 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CACNA2D1P54289 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CACNA2D1P54289 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CACNA2D1P54289 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.5■□□□□ 0.39
CACNA2D1P54289 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.5■□□□□ 0.39
CACNA2D1P54289 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.5■□□□□ 0.39
CACNA2D1P54289 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.5■□□□□ 0.39
CACNA2D1P54289 HLA-J-203ENST00000494367 1087 ntBASIC17.5■□□□□ 0.39
CACNA2D1P54289 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.5■□□□□ 0.39
CACNA2D1P54289 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.5■□□□□ 0.39
CACNA2D1P54289 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
CACNA2D1P54289 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CACNA2D1P54289 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.5■□□□□ 0.39
CACNA2D1P54289 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CACNA2D1P54289 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CACNA2D1P54289 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CACNA2D1P54289 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CACNA2D1P54289 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CACNA2D1P54289 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CACNA2D1P54289 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CACNA2D1P54289 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CACNA2D1P54289 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CACNA2D1P54289 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
CACNA2D1P54289 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CACNA2D1P54289 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CACNA2D1P54289 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CACNA2D1P54289 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CACNA2D1P54289 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CACNA2D1P54289 HLA-A-202ENST00000376806 1854 ntBASIC17.5■□□□□ 0.39
CACNA2D1P54289 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.5■□□□□ 0.39
CACNA2D1P54289 AGGF1P2-201ENST00000426656 2106 ntBASIC17.5■□□□□ 0.39
CACNA2D1P54289 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
CACNA2D1P54289 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CACNA2D1P54289 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.49■□□□□ 0.39
CACNA2D1P54289 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CACNA2D1P54289 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.49■□□□□ 0.39
CACNA2D1P54289 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CACNA2D1P54289 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.49■□□□□ 0.39
CACNA2D1P54289 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CACNA2D1P54289 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.49■□□□□ 0.39
CACNA2D1P54289 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CACNA2D1P54289 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CACNA2D1P54289 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
CACNA2D1P54289 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CACNA2D1P54289 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CACNA2D1P54289 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
CACNA2D1P54289 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CACNA2D1P54289 FOXO1B-201ENST00000504678 1527 ntBASIC17.49■□□□□ 0.39
CACNA2D1P54289 UXT-AS1-201ENST00000590504 1525 ntBASIC17.49■□□□□ 0.39
CACNA2D1P54289 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.49■□□□□ 0.39
CACNA2D1P54289 KRT18P32-201ENST00000424695 1287 ntBASIC17.49■□□□□ 0.39
CACNA2D1P54289 SLC25A39P2-201ENST00000537614 270 ntBASIC17.49■□□□□ 0.39
CACNA2D1P54289 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CACNA2D1P54289 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.49■□□□□ 0.39
CACNA2D1P54289 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.49■□□□□ 0.39
CACNA2D1P54289 AP000842.3-202ENST00000569238 1080 ntBASIC17.49■□□□□ 0.39
CACNA2D1P54289 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.49■□□□□ 0.39
CACNA2D1P54289 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.49■□□□□ 0.39
CACNA2D1P54289 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.49■□□□□ 0.39
CACNA2D1P54289 AC008267.7-201ENST00000624570 1194 ntBASIC17.49■□□□□ 0.39
CACNA2D1P54289 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
CACNA2D1P54289 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.49■□□□□ 0.39
CACNA2D1P54289 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CACNA2D1P54289 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CACNA2D1P54289 AC068418.2-201ENST00000577309 3703 ntBASIC17.49■□□□□ 0.39
CACNA2D1P54289 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.49■□□□□ 0.39
CACNA2D1P54289 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CACNA2D1P54289 AC006538.1-201ENST00000567905 1585 ntBASIC17.49■□□□□ 0.39
CACNA2D1P54289 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CACNA2D1P54289 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CACNA2D1P54289 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CACNA2D1P54289 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.48■□□□□ 0.39
CACNA2D1P54289 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms