Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLCN2P51788 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLCN2P51788 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLCN2P51788 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLCN2P51788 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.07■□□□□ 0.16
CLCN2P51788 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
CLCN2P51788 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLCN2P51788 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CLCN2P51788 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.07■□□□□ 0.16
CLCN2P51788 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC16.07■□□□□ 0.16
CLCN2P51788 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLCN2P51788 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLCN2P51788 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLCN2P51788 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
CLCN2P51788 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.06■□□□□ 0.16
CLCN2P51788 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.06■□□□□ 0.16
CLCN2P51788 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLCN2P51788 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLCN2P51788 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLCN2P51788 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLCN2P51788 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.06■□□□□ 0.16
CLCN2P51788 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLCN2P51788 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLCN2P51788 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.06■□□□□ 0.16
CLCN2P51788 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLCN2P51788 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLCN2P51788 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.06■□□□□ 0.16
CLCN2P51788 RNA5SP415-201ENST00000517246 115 ntBASIC16.06■□□□□ 0.16
CLCN2P51788 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLCN2P51788 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.06■□□□□ 0.16
CLCN2P51788 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.06■□□□□ 0.16
CLCN2P51788 AC145285.3-201ENST00000564603 959 ntBASIC16.06■□□□□ 0.16
CLCN2P51788 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.06■□□□□ 0.16
CLCN2P51788 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLCN2P51788 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.06■□□□□ 0.16
CLCN2P51788 Z83851.2-201ENST00000609564 659 ntBASIC16.06■□□□□ 0.16
CLCN2P51788 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.06■□□□□ 0.16
CLCN2P51788 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CLCN2P51788 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CLCN2P51788 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLCN2P51788 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CLCN2P51788 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.06■□□□□ 0.16
CLCN2P51788 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLCN2P51788 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLCN2P51788 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.06■□□□□ 0.16
CLCN2P51788 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLCN2P51788 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLCN2P51788 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CLCN2P51788 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLCN2P51788 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLCN2P51788 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CLCN2P51788 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLCN2P51788 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLCN2P51788 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CLCN2P51788 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLCN2P51788 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.05■□□□□ 0.16
CLCN2P51788 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLCN2P51788 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.05■□□□□ 0.16
CLCN2P51788 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.05■□□□□ 0.16
CLCN2P51788 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CLCN2P51788 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.05■□□□□ 0.16
CLCN2P51788 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLCN2P51788 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.05■□□□□ 0.16
CLCN2P51788 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CLCN2P51788 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLCN2P51788 AC104109.2-201ENST00000602919 1418 ntBASIC16.05■□□□□ 0.16
CLCN2P51788 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLCN2P51788 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLCN2P51788 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.05■□□□□ 0.16
CLCN2P51788 AP002490.2-201ENST00000524791 560 ntBASIC16.05■□□□□ 0.16
CLCN2P51788 UNC93B6-202ENST00000528242 690 ntBASIC16.05■□□□□ 0.16
CLCN2P51788 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.05■□□□□ 0.16
CLCN2P51788 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.05■□□□□ 0.16
CLCN2P51788 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.05■□□□□ 0.16
CLCN2P51788 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLCN2P51788 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.05■□□□□ 0.16
CLCN2P51788 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.05■□□□□ 0.16
CLCN2P51788 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLCN2P51788 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLCN2P51788 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLCN2P51788 AC092364.2-201ENST00000596710 2692 ntBASIC16.05■□□□□ 0.16
CLCN2P51788 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CLCN2P51788 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.05■□□□□ 0.16
CLCN2P51788 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLCN2P51788 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLCN2P51788 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.05■□□□□ 0.16
CLCN2P51788 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLCN2P51788 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.05■□□□□ 0.16
CLCN2P51788 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.05■□□□□ 0.16
CLCN2P51788 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CLCN2P51788 CROCCP1-201ENST00000426910 5675 ntBASIC16.04■□□□□ 0.16
CLCN2P51788 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CLCN2P51788 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLCN2P51788 HLA-A-202ENST00000376806 1854 ntBASIC16.04■□□□□ 0.16
CLCN2P51788 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
CLCN2P51788 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLCN2P51788 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLCN2P51788 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLCN2P51788 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CLCN2P51788 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms