Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
SOX2P48431 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SOX2P48431 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
SOX2P48431 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
SOX2P48431 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SOX2P48431 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SOX2P48431 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
SOX2P48431 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SOX2P48431 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
SOX2P48431 SNX33P1-201ENST00000592116 1762 ntBASIC14.61□□□□□ -0.07
SOX2P48431 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SOX2P48431 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SOX2P48431 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC14.61□□□□□ -0.07
SOX2P48431 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SOX2P48431 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SOX2P48431 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC14.61□□□□□ -0.07
SOX2P48431 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SOX2P48431 AC104819.1-201ENST00000504587 486 ntBASIC14.61□□□□□ -0.07
SOX2P48431 FAM86EP-206ENST00000510506 987 ntBASIC14.61□□□□□ -0.07
SOX2P48431 AP000867.3-201ENST00000524675 377 ntBASIC14.61□□□□□ -0.07
SOX2P48431 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC14.61□□□□□ -0.07
SOX2P48431 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC14.61□□□□□ -0.07
SOX2P48431 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC14.61□□□□□ -0.07
SOX2P48431 GZMM-202ENST00000592501 941 ntTSL 3 BASIC14.61□□□□□ -0.07
SOX2P48431 AL353135.1-201ENST00000606729 504 ntBASIC14.61□□□□□ -0.07
SOX2P48431 AC010331.1-201ENST00000611423 582 ntBASIC14.61□□□□□ -0.07
SOX2P48431 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SOX2P48431 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SOX2P48431 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SOX2P48431 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.61□□□□□ -0.07
SOX2P48431 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SOX2P48431 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
SOX2P48431 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SOX2P48431 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SOX2P48431 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SOX2P48431 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.61□□□□□ -0.07
SOX2P48431 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.61□□□□□ -0.07
SOX2P48431 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SOX2P48431 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.61□□□□□ -0.07
SOX2P48431 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
SOX2P48431 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.61□□□□□ -0.07
SOX2P48431 AC007326.2-201ENST00000624224 7579 ntBASIC14.61□□□□□ -0.07
SOX2P48431 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SOX2P48431 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SOX2P48431 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SOX2P48431 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SOX2P48431 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
SOX2P48431 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SOX2P48431 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
SOX2P48431 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SOX2P48431 AL512652.2-201ENST00000625156 1716 ntBASIC14.61□□□□□ -0.07
SOX2P48431 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SOX2P48431 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
SOX2P48431 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SOX2P48431 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.6□□□□□ -0.07
SOX2P48431 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.6□□□□□ -0.07
SOX2P48431 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
SOX2P48431 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
SOX2P48431 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SOX2P48431 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SOX2P48431 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SOX2P48431 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SOX2P48431 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.6□□□□□ -0.07
SOX2P48431 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
SOX2P48431 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.6□□□□□ -0.07
SOX2P48431 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SOX2P48431 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SOX2P48431 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SOX2P48431 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SOX2P48431 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SOX2P48431 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SOX2P48431 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SOX2P48431 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SOX2P48431 NUS1P2-201ENST00000417358 873 ntBASIC14.6□□□□□ -0.07
SOX2P48431 POM121L3P-201ENST00000419331 1163 ntBASIC14.6□□□□□ -0.07
SOX2P48431 BX005266.1-201ENST00000473402 457 ntBASIC14.6□□□□□ -0.07
SOX2P48431 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC14.6□□□□□ -0.07
SOX2P48431 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.6□□□□□ -0.07
SOX2P48431 AC099336.1-202ENST00000602961 463 ntBASIC14.6□□□□□ -0.07
SOX2P48431 AC073592.4-201ENST00000623827 446 ntBASIC14.6□□□□□ -0.07
SOX2P48431 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.6□□□□□ -0.07
SOX2P48431 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.6□□□□□ -0.07
SOX2P48431 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SOX2P48431 AL031731.1-201ENST00000642131 2094 ntBASIC14.6□□□□□ -0.07
SOX2P48431 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SOX2P48431 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SOX2P48431 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
SOX2P48431 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.6□□□□□ -0.07
SOX2P48431 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SOX2P48431 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC14.6□□□□□ -0.07
SOX2P48431 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SOX2P48431 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
SOX2P48431 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.6□□□□□ -0.07
SOX2P48431 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SOX2P48431 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SOX2P48431 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SOX2P48431 TOP3BP1-201ENST00000420768 1380 ntBASIC14.6□□□□□ -0.07
SOX2P48431 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
SOX2P48431 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.59□□□□□ -0.07
SOX2P48431 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms