Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
HTR3AP46098 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HTR3AP46098 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.32■□□□□ 0.04
HTR3AP46098 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.32■□□□□ 0.04
HTR3AP46098 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
HTR3AP46098 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HTR3AP46098 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HTR3AP46098 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HTR3AP46098 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
HTR3AP46098 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
HTR3AP46098 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HTR3AP46098 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.32■□□□□ 0.04
HTR3AP46098 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HTR3AP46098 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
HTR3AP46098 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HTR3AP46098 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HTR3AP46098 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HTR3AP46098 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HTR3AP46098 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HTR3AP46098 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.31■□□□□ 0.04
HTR3AP46098 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.31■□□□□ 0.04
HTR3AP46098 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HTR3AP46098 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
HTR3AP46098 AL365203.3-201ENST00000609742 2057 ntBASIC15.31■□□□□ 0.04
HTR3AP46098 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HTR3AP46098 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
HTR3AP46098 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HTR3AP46098 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HTR3AP46098 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HTR3AP46098 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HTR3AP46098 AC108073.2-201ENST00000464002 357 ntBASIC15.31■□□□□ 0.04
HTR3AP46098 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
HTR3AP46098 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.31■□□□□ 0.04
HTR3AP46098 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.31■□□□□ 0.04
HTR3AP46098 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.31■□□□□ 0.04
HTR3AP46098 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.31■□□□□ 0.04
HTR3AP46098 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
HTR3AP46098 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.31■□□□□ 0.04
HTR3AP46098 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.31■□□□□ 0.04
HTR3AP46098 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HTR3AP46098 AC116407.3-201ENST00000623905 1129 ntBASIC15.31■□□□□ 0.04
HTR3AP46098 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HTR3AP46098 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HTR3AP46098 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HTR3AP46098 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.31■□□□□ 0.04
HTR3AP46098 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
HTR3AP46098 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HTR3AP46098 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.31■□□□□ 0.04
HTR3AP46098 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.31■□□□□ 0.04
HTR3AP46098 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
HTR3AP46098 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HTR3AP46098 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HTR3AP46098 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HTR3AP46098 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HTR3AP46098 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
HTR3AP46098 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HTR3AP46098 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC15.31■□□□□ 0.04
HTR3AP46098 AL645728.1-201ENST00000366221 2101 ntBASIC15.31■□□□□ 0.04
HTR3AP46098 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.31■□□□□ 0.04
HTR3AP46098 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.31■□□□□ 0.04
HTR3AP46098 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
HTR3AP46098 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.31■□□□□ 0.04
HTR3AP46098 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HTR3AP46098 AC092171.3-201ENST00000610122 2651 ntBASIC15.3■□□□□ 0.04
HTR3AP46098 NFIC-211ENST00000641145 8399 ntBASIC15.3■□□□□ 0.04
HTR3AP46098 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HTR3AP46098 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HTR3AP46098 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HTR3AP46098 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HTR3AP46098 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HTR3AP46098 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.3■□□□□ 0.04
HTR3AP46098 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HTR3AP46098 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
HTR3AP46098 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
HTR3AP46098 HCG4-201ENST00000418983 998 ntBASIC15.3■□□□□ 0.04
HTR3AP46098 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.3■□□□□ 0.04
HTR3AP46098 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.3■□□□□ 0.04
HTR3AP46098 AC098831.1-202ENST00000438821 336 ntBASIC15.3■□□□□ 0.04
HTR3AP46098 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
HTR3AP46098 AC108751.1-201ENST00000490852 363 ntBASIC15.3■□□□□ 0.04
HTR3AP46098 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.3■□□□□ 0.04
HTR3AP46098 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.3■□□□□ 0.04
HTR3AP46098 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.3■□□□□ 0.04
HTR3AP46098 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.3■□□□□ 0.04
HTR3AP46098 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.3■□□□□ 0.04
HTR3AP46098 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15.3■□□□□ 0.04
HTR3AP46098 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.3■□□□□ 0.04
HTR3AP46098 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.3■□□□□ 0.04
HTR3AP46098 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HTR3AP46098 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.3■□□□□ 0.04
HTR3AP46098 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.3■□□□□ 0.04
HTR3AP46098 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.3■□□□□ 0.04
HTR3AP46098 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.3■□□□□ 0.04
HTR3AP46098 AC078925.2-201ENST00000624013 1973 ntBASIC15.3■□□□□ 0.04
HTR3AP46098 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HTR3AP46098 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HTR3AP46098 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.3■□□□□ 0.04
HTR3AP46098 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
HTR3AP46098 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HTR3AP46098 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms