Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 RNA5SP415-201ENST00000517246 115 ntBASIC15.24■□□□□ 0.03
SLC1A3P43003 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SLC1A3P43003 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.24■□□□□ 0.03
SLC1A3P43003 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.24■□□□□ 0.03
SLC1A3P43003 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.24■□□□□ 0.03
SLC1A3P43003 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC15.24■□□□□ 0.03
SLC1A3P43003 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SLC1A3P43003 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.24■□□□□ 0.03
SLC1A3P43003 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.24■□□□□ 0.03
SLC1A3P43003 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A3P43003 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A3P43003 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A3P43003 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A3P43003 AC024909.3-201ENST00000611513 2257 ntBASIC15.24■□□□□ 0.03
SLC1A3P43003 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A3P43003 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A3P43003 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.24■□□□□ 0.03
SLC1A3P43003 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A3P43003 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.24■□□□□ 0.03
SLC1A3P43003 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A3P43003 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A3P43003 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SLC1A3P43003 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SLC1A3P43003 AL671710.1-201ENST00000610245 2349 ntBASIC15.23■□□□□ 0.03
SLC1A3P43003 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.23■□□□□ 0.03
SLC1A3P43003 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SLC1A3P43003 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.23■□□□□ 0.03
SLC1A3P43003 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SLC1A3P43003 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC1A3P43003 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC1A3P43003 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC1A3P43003 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.23■□□□□ 0.03
SLC1A3P43003 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.23■□□□□ 0.03
SLC1A3P43003 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SLC1A3P43003 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC1A3P43003 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.23■□□□□ 0.03
SLC1A3P43003 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC1A3P43003 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
SLC1A3P43003 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC1A3P43003 CRYGEP-201ENST00000412192 528 ntBASIC15.23■□□□□ 0.03
SLC1A3P43003 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.23■□□□□ 0.03
SLC1A3P43003 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SLC1A3P43003 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SLC1A3P43003 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.23■□□□□ 0.03
SLC1A3P43003 CXCL1P1-201ENST00000502804 216 ntBASIC15.23■□□□□ 0.03
SLC1A3P43003 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.23■□□□□ 0.03
SLC1A3P43003 ACTL9-202ENST00000612068 1252 ntBASIC15.23■□□□□ 0.03
SLC1A3P43003 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC1A3P43003 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC1A3P43003 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SLC1A3P43003 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC1A3P43003 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC1A3P43003 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.23■□□□□ 0.03
SLC1A3P43003 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC1A3P43003 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SLC1A3P43003 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SLC1A3P43003 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.23■□□□□ 0.03
SLC1A3P43003 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
SLC1A3P43003 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.23■□□□□ 0.03
SLC1A3P43003 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.23■□□□□ 0.03
SLC1A3P43003 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC1A3P43003 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC1A3P43003 AL512652.2-201ENST00000625156 1716 ntBASIC15.23■□□□□ 0.03
SLC1A3P43003 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC1A3P43003 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC1A3P43003 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.23■□□□□ 0.03
SLC1A3P43003 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SLC1A3P43003 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC1A3P43003 AC012569.1-201ENST00000591191 1524 ntBASIC15.22■□□□□ 0.03
SLC1A3P43003 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.22■□□□□ 0.03
SLC1A3P43003 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLC1A3P43003 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC1A3P43003 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC1A3P43003 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC1A3P43003 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
SLC1A3P43003 AC103702.1-201ENST00000548801 2630 ntBASIC15.22■□□□□ 0.03
SLC1A3P43003 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC1A3P43003 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.22■□□□□ 0.03
SLC1A3P43003 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLC1A3P43003 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
SLC1A3P43003 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC1A3P43003 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC1A3P43003 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC1A3P43003 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC1A3P43003 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.22■□□□□ 0.03
SLC1A3P43003 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.22■□□□□ 0.03
SLC1A3P43003 AC079776.4-201ENST00000511039 504 ntBASIC15.22■□□□□ 0.03
SLC1A3P43003 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.22■□□□□ 0.03
SLC1A3P43003 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.22■□□□□ 0.03
SLC1A3P43003 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.22■□□□□ 0.03
SLC1A3P43003 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SLC1A3P43003 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
SLC1A3P43003 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC1A3P43003 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC1A3P43003 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.22■□□□□ 0.03
SLC1A3P43003 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC1A3P43003 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC1A3P43003 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC1A3P43003 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.22■□□□□ 0.03
SLC1A3P43003 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms