Protein–RNA interactions for Protein: P42773

CDKN2C, Cyclin-dependent kinase 4 inhibitor C, humanhuman

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2CP42773 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDKN2CP42773 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CDKN2CP42773 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDKN2CP42773 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDKN2CP42773 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDKN2CP42773 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDKN2CP42773 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDKN2CP42773 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.65■□□□□ 0.1
CDKN2CP42773 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.65■□□□□ 0.1
CDKN2CP42773 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.65■□□□□ 0.1
CDKN2CP42773 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDKN2CP42773 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
CDKN2CP42773 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDKN2CP42773 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.65■□□□□ 0.1
CDKN2CP42773 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.64■□□□□ 0.1
CDKN2CP42773 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
CDKN2CP42773 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDKN2CP42773 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.64■□□□□ 0.09
CDKN2CP42773 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CDKN2CP42773 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.64■□□□□ 0.09
CDKN2CP42773 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDKN2CP42773 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDKN2CP42773 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CDKN2CP42773 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDKN2CP42773 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDKN2CP42773 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
CDKN2CP42773 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
CDKN2CP42773 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.64■□□□□ 0.09
CDKN2CP42773 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDKN2CP42773 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDKN2CP42773 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CDKN2CP42773 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDKN2CP42773 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.64■□□□□ 0.09
CDKN2CP42773 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.64■□□□□ 0.09
CDKN2CP42773 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.64■□□□□ 0.09
CDKN2CP42773 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.64■□□□□ 0.09
CDKN2CP42773 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.64■□□□□ 0.09
CDKN2CP42773 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CDKN2CP42773 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.64■□□□□ 0.09
CDKN2CP42773 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC15.64■□□□□ 0.09
CDKN2CP42773 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
CDKN2CP42773 AC008667.4-201ENST00000607370 168 ntBASIC15.64■□□□□ 0.09
CDKN2CP42773 GGTLC5P-201ENST00000617623 998 ntBASIC15.64■□□□□ 0.09
CDKN2CP42773 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.64■□□□□ 0.09
CDKN2CP42773 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDKN2CP42773 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDKN2CP42773 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CDKN2CP42773 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.64■□□□□ 0.09
CDKN2CP42773 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDKN2CP42773 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDKN2CP42773 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.64■□□□□ 0.09
CDKN2CP42773 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDKN2CP42773 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
CDKN2CP42773 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDKN2CP42773 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.64■□□□□ 0.09
CDKN2CP42773 AC129492.6-201ENST00000611383 1305 ntBASIC15.64■□□□□ 0.09
CDKN2CP42773 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDKN2CP42773 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDKN2CP42773 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDKN2CP42773 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
CDKN2CP42773 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDKN2CP42773 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDKN2CP42773 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDKN2CP42773 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDKN2CP42773 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.63■□□□□ 0.09
CDKN2CP42773 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
CDKN2CP42773 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDKN2CP42773 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
CDKN2CP42773 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.63■□□□□ 0.09
CDKN2CP42773 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDKN2CP42773 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDKN2CP42773 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDKN2CP42773 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDKN2CP42773 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDKN2CP42773 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDKN2CP42773 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDKN2CP42773 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.63■□□□□ 0.09
CDKN2CP42773 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDKN2CP42773 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
CDKN2CP42773 HCG4-201ENST00000418983 998 ntBASIC15.63■□□□□ 0.09
CDKN2CP42773 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
CDKN2CP42773 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.63■□□□□ 0.09
CDKN2CP42773 UNC93B7-201ENST00000509439 705 ntBASIC15.63■□□□□ 0.09
CDKN2CP42773 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.63■□□□□ 0.09
CDKN2CP42773 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.63■□□□□ 0.09
CDKN2CP42773 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC15.63■□□□□ 0.09
CDKN2CP42773 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDKN2CP42773 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CDKN2CP42773 TP73-AS1-207ENST00000624167 988 ntBASIC15.63■□□□□ 0.09
CDKN2CP42773 AP001350.2-201ENST00000625104 1094 ntBASIC15.63■□□□□ 0.09
CDKN2CP42773 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.63■□□□□ 0.09
CDKN2CP42773 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.63■□□□□ 0.09
CDKN2CP42773 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CDKN2CP42773 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDKN2CP42773 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CDKN2CP42773 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDKN2CP42773 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDKN2CP42773 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
CDKN2CP42773 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CDKN2CP42773 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms