Protein–RNA interactions for Protein: P35908

KRT2, Keratin, type II cytoskeletal 2 epidermal, humanhuman

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT2P35908 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
KRT2P35908 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
KRT2P35908 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
KRT2P35908 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
KRT2P35908 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KRT2P35908 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KRT2P35908 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC18.91■□□□□ 0.62
KRT2P35908 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KRT2P35908 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
KRT2P35908 NEK7-201ENST00000367383 586 ntTSL 2 BASIC18.91■□□□□ 0.62
KRT2P35908 PMP22-202ENST00000395936 816 ntTSL 3 BASIC18.91■□□□□ 0.62
KRT2P35908 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.91■□□□□ 0.62
KRT2P35908 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.91■□□□□ 0.62
KRT2P35908 AC004832.2-201ENST00000426397 482 ntBASIC18.91■□□□□ 0.62
KRT2P35908 FAM58CP-201ENST00000435741 640 ntBASIC18.91■□□□□ 0.62
KRT2P35908 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
KRT2P35908 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
KRT2P35908 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.91■□□□□ 0.62
KRT2P35908 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC18.91■□□□□ 0.62
KRT2P35908 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.91■□□□□ 0.62
KRT2P35908 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.91■□□□□ 0.62
KRT2P35908 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
KRT2P35908 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
KRT2P35908 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC18.91■□□□□ 0.62
KRT2P35908 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KRT2P35908 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
KRT2P35908 AC006449.6-201ENST00000612330 2296 ntBASIC18.91■□□□□ 0.62
KRT2P35908 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
KRT2P35908 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KRT2P35908 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC18.91■□□□□ 0.62
KRT2P35908 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KRT2P35908 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KRT2P35908 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
KRT2P35908 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KRT2P35908 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC18.91■□□□□ 0.62
KRT2P35908 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC18.91■□□□□ 0.62
KRT2P35908 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
KRT2P35908 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
KRT2P35908 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC18.91■□□□□ 0.62
KRT2P35908 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
KRT2P35908 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC18.91■□□□□ 0.62
KRT2P35908 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KRT2P35908 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KRT2P35908 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC18.91■□□□□ 0.62
KRT2P35908 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRT2P35908 ACE-204ENST00000428043 5120 ntTSL 2 BASIC18.9■□□□□ 0.62
KRT2P35908 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRT2P35908 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRT2P35908 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRT2P35908 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
KRT2P35908 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRT2P35908 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRT2P35908 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRT2P35908 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.9■□□□□ 0.62
KRT2P35908 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRT2P35908 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRT2P35908 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRT2P35908 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC18.9■□□□□ 0.62
KRT2P35908 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC18.9■□□□□ 0.62
KRT2P35908 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
KRT2P35908 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRT2P35908 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRT2P35908 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.9■□□□□ 0.62
KRT2P35908 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRT2P35908 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRT2P35908 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
KRT2P35908 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRT2P35908 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC18.9■□□□□ 0.62
KRT2P35908 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
KRT2P35908 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
KRT2P35908 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC18.9■□□□□ 0.62
KRT2P35908 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC18.9■□□□□ 0.62
KRT2P35908 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
KRT2P35908 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
KRT2P35908 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC18.9■□□□□ 0.62
KRT2P35908 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.9■□□□□ 0.62
KRT2P35908 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.9■□□□□ 0.62
KRT2P35908 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRT2P35908 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRT2P35908 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC18.9■□□□□ 0.62
KRT2P35908 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.9■□□□□ 0.62
KRT2P35908 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
KRT2P35908 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRT2P35908 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRT2P35908 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
KRT2P35908 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
KRT2P35908 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC18.89■□□□□ 0.62
KRT2P35908 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.89■□□□□ 0.62
KRT2P35908 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
KRT2P35908 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.62
KRT2P35908 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
KRT2P35908 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT2P35908 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
KRT2P35908 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
KRT2P35908 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT2P35908 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
KRT2P35908 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
KRT2P35908 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC18.89■□□□□ 0.61
KRT2P35908 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.89■□□□□ 0.61
KRT2P35908 RARRES2P8-201ENST00000566335 367 ntBASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms